Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.1e-202 708.8 346 100.0
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 4.3e-179 631.3 344 87.8
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 1.2e-173 613.2 358 84.4
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 1.0e-172 610.1 346 83.2
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 2.3e-172 609.0 345 82.3
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 2.5e-171 605.5 345 83.5
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 9.6e-171 603.6 344 82.3
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 9.6e-171 603.6 345 82.9
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.2e-170 603.2 344 82.3
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 2.8e-170 602.1 344 82.3
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 2.8e-170 602.1 344 82.6
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 3.6e-170 601.7 344 82.3
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 8.1e-170 600.5 391 76.5
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 1.1e-169 600.1 345 81.2
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.4e-169 599.7 342 82.2
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.4e-169 599.0 345 82.9
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.4e-169 599.0 345 82.9
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 3.1e-169 598.6 344 82.0
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 5.2e-169 597.8 341 82.7
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 5.2e-169 597.8 342 82.5
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 9.0e-169 597.0 344 82.3
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 9.0e-169 597.0 344 81.7
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.5e-168 596.3 342 82.2
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 2.0e-168 595.9 342 82.2
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 2.0e-168 595.9 345 81.4
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 2.6e-168 595.5 345 80.9
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 3.4e-168 595.1 342 81.3
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 7.6e-168 594.0 341 80.9
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 9.9e-168 593.6 342 81.0
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 2.9e-167 592.0 344 80.8
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 2.9e-167 592.0 341 82.1
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 2.9e-167 592.0 341 81.8
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 3.8e-167 591.7 344 81.4
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 4.9e-167 591.3 342 81.3
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 6.4e-167 590.9 344 80.2
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 6.4e-167 590.9 342 81.3
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 1.1e-166 590.1 341 81.8
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.9e-166 589.3 346 80.3
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 1.9e-166 589.3 342 81.6
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 1.9e-166 589.3 344 79.9
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 2.4e-166 589.0 344 81.1
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 3.2e-166 588.6 344 82.0
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 4.2e-166 588.2 344 80.8
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 5.4e-166 587.8 342 81.3
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 9.3e-166 587.0 342 80.7
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 9.3e-166 587.0 344 80.2
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 9.3e-166 587.0 344 80.2
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 9.3e-166 587.0 345 79.7
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 2.1e-165 585.9 345 80.9
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 4.6e-165 584.7 344 79.9
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 4.6e-165 584.7 345 79.7
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 4.6e-165 584.7 344 79.4
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 6.0e-165 584.3 344 79.4
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 6.0e-165 584.3 342 81.0
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 6.0e-165 584.3 342 80.1
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 6.0e-165 584.3 342 80.7
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 7.8e-165 583.9 346 79.5
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 7.8e-165 583.9 345 79.1
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 1.0e-164 583.6 342 79.8
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 1.0e-164 583.6 344 79.1
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.0e-164 583.6 362 77.3
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.3e-164 583.2 344 79.7
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 1.3e-164 583.2 342 79.5
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.7e-164 582.8 342 78.7
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 5.1e-164 581.3 342 80.1
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 5.1e-164 581.3 342 80.4
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 6.6e-164 580.9 344 78.8
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 6.6e-164 580.9 342 79.8
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 8.7e-164 580.5 344 79.4
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 8.7e-164 580.5 346 79.8
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.1e-163 580.1 345 80.6
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 1.5e-163 579.7 342 79.2
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 1.5e-163 579.7 342 79.8
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 1.5e-163 579.7 342 79.2
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 1.9e-163 579.3 358 77.9
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 2.5e-163 578.9 342 78.1
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 3.3e-163 578.6 342 79.5
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 3.3e-163 578.6 342 78.4
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 4.3e-163 578.2 351 78.9
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 9.6e-163 577.0 344 79.9
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 9.6e-163 577.0 342 78.7
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 1.3e-162 576.6 342 80.4
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 2.1e-162 575.9 346 79.2
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 4.8e-162 574.7 340 78.8
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 1.1e-161 573.5 342 79.2
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 2.4e-161 572.4 341 79.2
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 9.0e-161 570.5 344 77.9
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 2.6e-160 568.9 345 78.3
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 7.6e-160 567.4 341 76.8
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 9.3e-158 560.5 344 78.8
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 1.2e-157 560.1 343 77.0
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 2.1e-157 559.3 318 83.0
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 1.0e-156 557.0 354 76.8
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 2.5e-155 552.4 345 75.7
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 7.4e-155 550.8 344 76.2
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 9.6e-155 550.4 362 73.5
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 2.4e-153 545.8 430 63.5
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 3.8e-151 538.5 343 73.5
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 1.3e-148 530.0 444 60.6
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 1.5e-147 526.6 348 73.6
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 1.3e-146 523.5 345 71.3
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.8e-146 522.3 260 96.5
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 6.2e-146 521.2 305 80.7
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 1.1e-145 520.4 353 71.1
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 1.4e-142 510.0 343 71.1
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 9.3e-142 507.3 339 71.4
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 6.0e-141 504.6 345 70.4
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 1.5e-139 500.0 345 72.2
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 3.7e-138 495.4 345 70.1
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 7.4e-131 471.1 255 88.6
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 8.2e-130 467.6 272 80.5
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.0e-127 460.7 326 66.9
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 4.7e-125 451.8 345 66.1
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.8e-119 432.2 312 70.5
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 1.9e-118 429.9 312 70.2
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 9.4e-118 427.6 344 59.9
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 8.2e-114 414.5 385 57.9
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 2.7e-109 399.4 231 79.7
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.7e-106 389.0 301 65.4
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 1.1e-105 387.5 340 54.4
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 4.1e-105 385.6 228 80.3
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 3.2e-102 375.9 249 71.9
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 7.5e-99 364.8 347 57.3
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 1.8e-97 360.1 339 53.7
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 2.5e-94 349.7 344 52.9
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 3.5e-88 329.3 254 66.5
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 3.8e-87 325.9 189 82.5
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 1.8e-84 317.0 190 80.0
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 4.6e-80 302.4 174 79.3
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 3.2e-73 279.6 219 65.3
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 3.6e-61 239.6 157 73.9
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 2.7e-56 223.4 134 80.6
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 2.6e-51 206.8 115 81.7
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 1.0e-47 194.9 112 76.8
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 7.3e-46 188.7 345 35.4
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 8.4e-42 175.3 251 45.4
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 1.0e-39 168.3 94 85.1
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 1.6e-37 161.0 99 76.8
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 2.0e-35 154.1 357 32.2
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.5e-27 126.3 95 66.3
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.9e-26 122.9 171 47.4
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-22 111.7 81 70.4
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 9.7e-22 108.6 257 32.3
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 3.2e-17 93.6 85 56.5
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 1.4e-12 78.2 45 80.0
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 2.6e-11 73.9 47 70.2


User provided reference genes

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