Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 2.7e-160 568.5 272 100.0
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 2.8e-157 558.5 272 98.2
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 2.0e-131 472.6 271 82.7
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 2.8e-117 425.6 271 74.2
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 1.4e-108 396.7 272 67.6
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 3.4e-107 392.1 272 67.3
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 5.9e-107 391.3 272 66.5
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 2.9e-106 389.0 268 67.5
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 5.0e-106 388.3 272 65.8
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 2.5e-105 386.0 272 65.1
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 3.2e-105 385.6 272 64.7
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 5.5e-105 384.8 272 66.2
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.6e-104 383.3 272 64.0
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 1.6e-104 383.3 272 64.7
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 1.6e-104 383.3 272 64.0
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 2.1e-104 382.9 271 65.7
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 2.1e-104 382.9 271 65.7
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 6.1e-104 381.3 272 64.7
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 7.9e-104 380.9 272 64.3
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 1.4e-103 380.2 272 64.3
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 1.4e-103 380.2 272 64.0
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 3.9e-103 378.6 269 65.8
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 5.1e-103 378.3 272 64.3
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 9.7e-102 374.0 256 67.6
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 9.7e-102 374.0 279 62.4
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 2.2e-101 372.9 273 64.8
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 2.8e-101 372.5 272 64.3
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 6.3e-101 371.3 273 65.2
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 5.3e-100 368.2 272 63.2
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 1.2e-99 367.1 273 63.4
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 2.0e-99 366.3 272 62.1
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 3.4e-99 365.5 273 62.6
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 1.0e-98 364.0 273 62.6
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 1.7e-98 363.2 274 62.8
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.7e-98 363.2 272 61.8
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.7e-98 363.2 272 61.4
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 2.2e-98 362.8 275 61.5
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 3.8e-98 362.1 272 62.1
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 5.0e-98 361.7 271 62.7
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 1.4e-97 360.1 273 63.4
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 3.2e-97 359.0 275 61.1
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 1.6e-96 356.7 273 63.4
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 2.1e-96 356.3 269 61.7
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.4e-95 353.6 255 64.3
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 3.0e-95 352.4 275 60.7
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 1.1e-94 350.5 270 60.7
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 1.3e-93 347.1 244 64.3
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 2.0e-91 339.7 264 60.6
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 2.2e-90 336.3 247 61.9
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 6.1e-88 328.2 252 59.9
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 6.1e-88 328.2 270 55.6
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 5.2e-87 325.1 253 59.7
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 1.1e-86 323.9 252 59.1
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 1.1e-86 323.9 252 59.1
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 1.1e-86 323.9 252 59.1
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 1.5e-86 323.6 256 59.0
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 3.3e-86 322.4 252 59.1
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 3.3e-86 322.4 252 59.1
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 1.7e-85 320.1 252 58.7
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 1.4e-84 317.0 269 56.9
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 1.4e-84 317.0 231 62.3
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 2.7e-83 312.8 243 61.7
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 2.7e-83 312.8 224 65.2
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 6.5e-82 308.1 268 57.5
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 1.1e-81 307.4 265 55.1
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 4.4e-78 295.4 254 54.7
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 5.7e-78 295.0 272 51.5
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 7.5e-78 294.7 239 58.6
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 1.8e-76 290.0 262 51.9
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 2.0e-54 216.9 252 44.4
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 4.6e-51 205.7 259 43.6
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 4.7e-48 195.7 170 56.5
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 8.1e-48 194.9 169 57.4
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 6.0e-43 178.7 252 40.1
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 1.2e-40 171.0 137 62.8
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 7.3e-33 145.2 260 33.1
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 1.3e-24 117.9 129 47.3
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 2.3e-18 97.1 149 36.9


User provided reference genes

Program Settings