Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.3e-102 374.0 178 100.0
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.9e-75 285.0 176 77.3
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 1.2e-68 263.5 174 72.4
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 3.5e-68 261.9 174 71.8
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-57 226.1 166 62.7
AUR62012547 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.2e-53 211.8 164 63.4
AUR62012550 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.3e-51 206.8 173 61.8
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.1e-48 197.2 146 61.0
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 9.0e-48 194.1 168 57.7
AUR62014651 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.5e-39 166.8 99 81.8
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-35 152.9 98 70.4
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 9.7e-34 147.5 173 46.2
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.9e-30 136.0 169 42.6
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 6.5e-30 134.8 171 42.7
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 8.5e-30 134.4 168 42.9
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.5e-29 131.7 169 41.4
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.2e-29 131.3 172 40.1
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.6e-28 130.2 171 41.5
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.8e-27 126.7 168 41.1
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.3e-27 126.3 167 40.7
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.1e-27 125.2 176 39.2
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 8.8e-27 124.4 134 46.3
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.5e-26 123.6 168 39.9
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 1.5e-26 123.6 167 41.3
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 4.3e-26 122.1 171 38.0
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 5.7e-26 121.7 168 38.7
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 9.7e-26 120.9 167 38.9
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 1.7e-25 120.2 160 42.5
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 2.8e-25 119.4 175 38.9
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 6.3e-25 118.2 177 37.9
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 1.4e-24 117.1 166 41.6
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 1.8e-24 116.7 170 37.6
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.4e-24 116.3 176 38.1
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-23 114.0 151 40.4
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 1.5e-23 113.6 168 40.5
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.6e-23 112.8 170 38.2
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 2.6e-23 112.8 170 38.2
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.7e-23 111.3 148 37.8
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-22 110.2 149 38.3
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.9e-22 109.4 156 38.5
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.5e-22 108.2 172 36.0
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 8.5e-22 107.8 150 39.3
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.2e-20 104.0 171 36.3
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.2e-20 104.0 171 35.7
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.1e-20 103.2 165 33.9
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 3.6e-20 102.4 169 36.1
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.0e-19 100.9 167 34.1
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.0e-19 100.9 171 35.1
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 1.0e-19 100.9 162 35.8
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.4e-19 100.5 170 37.1
AUR62014648 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-19 99.8 65 70.8
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.1e-19 98.6 150 35.3
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.1e-19 98.6 170 34.7
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 6.7e-19 98.2 170 34.1
Duzib212G1045 Durio zibethinus HOM05D004865 ORTHO05D005949 6.7e-19 98.2 167 33.5
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.7e-19 98.2 150 34.0
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 1.1e-18 97.4 163 31.9
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.5e-18 97.1 97 44.3
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 3.3e-18 95.9 170 30.0
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 4.4e-18 95.5 195 31.8
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 5.7e-18 95.1 168 36.3
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.4e-18 94.7 120 41.7
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 7.4e-18 94.7 169 29.6
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 9.7e-18 94.4 167 28.7
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 1.3e-17 94.0 170 27.1
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-17 94.0 97 42.3
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 1.3e-17 94.0 166 30.1
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.7e-17 93.6 168 32.7
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.2e-17 93.2 166 27.7
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.2e-17 93.2 170 28.2
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 4.8e-17 92.0 184 30.4
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 6.3e-17 91.7 166 31.3
SGA_v2.0_scaffold11G05649 Striga asiatica HOM05D004865 ORTHO05D005949 8.2e-17 91.3 169 30.8
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 1.1e-16 90.9 169 30.2
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.4e-16 90.5 97 45.4
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.8e-16 90.1 171 30.4
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.8e-16 90.1 170 27.6
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 1.8e-16 90.1 97 41.2
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.4e-16 89.7 168 32.7
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.1e-16 89.4 171 31.0
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.1e-16 89.4 114 36.0
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.9e-16 88.2 168 31.5
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 6.9e-16 88.2 96 39.6
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 6.9e-16 88.2 96 39.6
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 9.1e-16 87.8 96 38.5
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 9.1e-16 87.8 96 38.5
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.0e-15 86.7 51 76.5
Gohir.D10G128100 Gossypium hirsutum HOM05D004865 ORTHO05D005949 2.0e-15 86.7 134 32.8
Gorai.011G141300 Gossypium raimondii HOM05D004865 ORTHO05D005949 2.0e-15 86.7 134 32.8
Gohir.A10G138700 Gossypium hirsutum HOM05D004865 ORTHO05D005949 2.6e-15 86.3 134 32.8
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 2.6e-15 86.3 172 29.1
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 3.4e-15 85.9 137 38.7
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 3.4e-15 85.9 169 32.5
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 3.4e-15 85.9 97 41.2
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 4.5e-15 85.5 97 43.3
CSS0013136 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.0e-14 84.3 164 33.5
Os04g0308500 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 1.0e-14 84.3 166 30.1
Os04g0310100 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 1.0e-14 84.3 166 30.1
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 1.7e-14 83.6 96 39.6
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 1.7e-14 83.6 96 39.6
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.5e-14 81.6 111 36.0
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 8.5e-14 81.3 169 30.8
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 5.5e-13 78.6 170 27.6
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-12 77.4 97 37.1
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 1.2e-12 77.4 97 37.1
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 1.6e-12 77.0 168 28.6
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.1e-12 76.6 109 35.8
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 4.7e-12 75.5 97 36.1
EL10Ac6g13635 Beta vulgaris HOM05D004865 ORTHO05D005949 3.0e-11 72.8 174 29.9
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.0e-10 70.1 107 38.3
HanXRQChr13g0416751 Helianthus annuus HOM05D004865 ORTHO05D005949 2.0e-10 70.1 151 31.8
HanXRQChr13g0416771 Helianthus annuus HOM05D004865 ORTHO05D005949 2.0e-10 70.1 151 31.8
Zm00001eb137410 Zea mays HOM05D004865 ORTHO05D005949 2.6e-10 69.7 160 30.6
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 7.4e-10 68.2 144 32.6
HanXRQChr17g0555801 Helianthus annuus HOM05D004865 ORTHO05D005949 7.4e-10 68.2 173 30.1
HanXRQChr03g0085651 Helianthus annuus HOM05D004865 ORTHO05D005949 9.7e-10 67.8 128 32.0
HanXRQChr17g0555831 Helianthus annuus HOM05D004865 ORTHO05D005949 9.7e-10 67.8 173 30.1
Zm00001eb137380 Zea mays HOM05D004865 ORTHO05D005949 9.7e-10 67.8 160 30.0
ECA233G1731 Erigeron canadensis HOM05D004865 ORTHO05D005949 3.7e-09 65.9 80 43.8
Lsat_1_v5_gn_0_11001 Lactuca sativa HOM05D004865 ORTHO05D005949 6.3e-09 65.1 102 33.3
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 8.2e-09 64.7 143 28.0
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.1e-08 62.8 64 43.8
Lsat_1_v5_gn_6_87560 Lactuca sativa HOM05D004865 ORTHO05D005949 4.1e-08 62.4 119 31.1
CsaV3_4G030090 Cucumis sativus L. HOM05D004865 ORTHO05D005949 5.3e-08 62.0 64 40.6
HanXRQChr13g0416741 Helianthus annuus HOM05D004865 ORTHO05D005949 5.3e-08 62.0 101 36.6
ECA233G5215 Erigeron canadensis HOM05D004865 ORTHO05D005949 7.0e-08 61.6 175 29.7
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 9.1e-08 61.2 163 26.4
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 9.1e-08 61.2 167 26.9
ECA233G2698 Erigeron canadensis HOM05D004865 ORTHO05D005949 1.2e-07 60.8 173 28.9
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 1.6e-07 60.5 176 28.4
Prupe.2G116900 Prunus persica HOM05D004865 ORTHO05D005949 1.6e-07 60.5 196 26.0
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 3.5e-07 59.3 165 27.9
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 3.5e-07 59.3 59 45.8
ECA233G6014 Erigeron canadensis HOM05D004865 ORTHO05D005949 2.2e-06 56.6 59 45.8
Duzib128G0388 Durio zibethinus HOM05D014226 ORTHO05D016989 3.8e-06 55.8 133 29.3
Lj6P371T11 Lonicera japonica HOM05D004865 ORTHO05D005949 8.5e-06 54.7 59 39.0


User provided reference genes

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