Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012550 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-99 365.5 178 100.0
AUR62012547 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.9e-78 294.7 184 80.4
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.2e-76 290.0 221 69.7
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 5.2e-64 248.1 219 58.4
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 5.2e-64 248.1 219 58.0
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.6e-57 225.3 217 55.8
AUR62014648 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.8e-56 223.0 178 66.9
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-51 206.1 173 61.8
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 6.2e-49 198.0 217 53.5
AUR62014651 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.8e-41 171.8 99 83.8
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.6e-36 156.8 113 65.5
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 7.2e-29 131.3 149 51.7
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.6e-23 112.8 215 35.3
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.7e-22 110.2 64 87.5
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 3.8e-22 109.0 217 35.9
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.5e-22 108.2 216 34.3
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 8.5e-22 107.8 214 34.6
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-21 107.1 216 32.4
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-21 107.1 221 34.4
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 4.2e-21 105.5 215 35.8
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 5.5e-21 105.1 215 34.9
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 9.4e-21 104.4 214 33.6
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-20 103.6 217 31.3
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 2.7e-20 102.8 214 33.6
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 7.9e-20 101.3 214 33.6
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.8e-19 100.1 215 32.1
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 3.9e-19 99.0 217 33.6
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 5.1e-19 98.6 223 30.9
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 2.0e-18 96.7 215 33.5
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.6e-18 96.3 221 31.7
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 7.4e-18 94.7 210 32.9
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 7.4e-18 94.7 210 32.9
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 9.7e-18 94.4 212 32.5
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 1.3e-17 94.0 214 32.7
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 2.8e-17 92.8 214 32.2
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 1.8e-16 90.1 180 35.0
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 9.1e-16 87.8 219 30.1
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 3.4e-15 85.9 210 32.9
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 4.5e-15 85.5 214 30.8
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.0e-14 84.3 214 30.8
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.9e-14 82.8 111 41.4
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.4e-13 80.5 212 27.8
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.9e-13 80.1 217 29.5
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 2.5e-13 79.7 212 29.2
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.2e-13 78.2 216 27.8
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.7e-12 76.3 217 27.2
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 3.6e-12 75.9 213 28.6
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.7e-12 75.5 212 27.8
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.1e-12 75.1 218 29.8
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.8e-11 73.6 208 26.4
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.7e-11 71.6 159 28.3
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.7e-11 71.6 217 27.2
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.1e-10 70.9 217 28.6
CSS0028314 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.5e-10 70.5 225 28.0
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 4.4e-10 68.9 212 27.8
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 9.7e-10 67.8 113 35.4
Os04g0308400 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 3.7e-09 65.9 213 25.8
Os04g0310200 Oryza sativa ssp. japonica HOM05D004865 ORTHO05D005949 3.7e-09 65.9 213 25.8
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.7e-09 65.9 161 26.1
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.4e-08 63.2 184 28.3
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 3.1e-08 62.8 207 25.1
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 3.1e-08 62.8 144 32.6
Sc05g0005670 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-07 60.8 56 48.2
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 1.6e-07 60.5 207 25.6
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 1.6e-07 60.5 207 25.6
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.5e-07 58.9 215 27.0
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 5.9e-07 58.5 213 23.9
AUR62027395 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.0e-06 57.8 197 26.4
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-06 57.0 203 24.6
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.2e-06 56.6 75 42.7
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 5.0e-06 55.5 129 30.2
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 6.5e-06 55.1 112 32.1


User provided reference genes

Program Settings