Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 8.1e-271 937.2 766 100.0
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 3.2e-251 872.1 765 83.7
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 3.0e-132 476.9 750 57.1
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 2.6e-104 384.0 761 53.6
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.8e-90 337.4 737 47.6
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 1.1e-86 325.5 770 47.1
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 3.4e-83 313.9 766 48.0
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.3e-79 302.0 738 55.7
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 4.2e-78 297.0 760 45.0
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 2.3e-76 291.2 758 53.6
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 4.4e-75 287.0 757 52.7
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.7e-74 285.0 774 46.3
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 3.7e-74 283.9 766 50.0
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.7e-74 283.9 747 41.8
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 3.7e-74 283.9 758 47.1
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 8.3e-74 282.7 736 45.7
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.4e-73 281.2 771 45.5
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.5e-70 271.2 765 48.4
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 7.2e-70 269.6 774 49.0
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.2e-69 268.9 736 44.0
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.6e-69 268.5 747 43.0
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.4e-68 265.4 772 45.5
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.6e-67 261.2 743 44.4
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.7e-66 258.5 766 45.6
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.8e-66 257.7 747 42.0
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 1.4e-65 255.4 732 44.8
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.8e-65 255.0 772 53.1
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 2.7e-64 251.1 765 43.8
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 1.5e-62 245.4 758 51.1
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.9e-62 245.0 773 49.3
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.9e-62 245.0 772 46.9
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 4.3e-62 243.8 766 44.9
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 2.3e-60 238.0 694 54.3
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 4.0e-60 237.3 743 44.3
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 5.2e-60 236.9 736 52.3
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 7.5e-59 233.0 772 46.1
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 4.9e-58 230.3 737 40.4
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 8.3e-58 229.6 738 56.6
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 8.3e-58 229.6 757 50.5
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.9e-57 228.4 766 45.4
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.6e-56 225.3 768 48.6
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.3e-55 221.5 736 52.2
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 2.3e-55 221.5 738 46.7
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 6.6e-55 219.9 774 48.8
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.8e-53 214.5 769 50.3
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 3.1e-52 211.1 540 49.6
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 4.0e-52 210.7 741 53.2
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 6.8e-52 209.9 768 38.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 2.6e-51 208.0 778 38.9
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.6e-51 208.0 779 44.0
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 1.3e-50 205.7 400 42.5
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.9e-50 204.5 771 51.8
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 3.7e-50 204.1 756 48.0
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 4.1e-49 200.7 741 49.3
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 5.4e-49 200.3 526 39.0
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 1.3e-47 195.7 696 48.6
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.1e-46 192.6 735 41.4
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.2e-45 189.1 773 39.2
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.2e-45 189.1 504 36.9
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 1.6e-45 188.7 742 50.4
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.7e-45 187.2 335 49.3
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.3e-44 184.9 779 42.9
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 2.3e-44 184.9 396 42.4
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 6.8e-44 183.3 744 42.1
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.4e-43 181.0 743 49.3
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 7.6e-43 179.9 389 41.4
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 9.9e-43 179.5 737 49.5
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 2.2e-42 178.3 404 39.4
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 2.9e-42 177.9 396 41.9
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 2.4e-41 174.9 763 50.1
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 2.3e-39 168.3 740 40.5
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 3.9e-39 167.5 745 38.7
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 8.6e-39 166.4 767 38.7
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.8e-37 161.4 745 49.1
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 3.6e-37 161.0 396 40.2
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 3.6e-37 161.0 396 40.2
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.1e-36 159.5 776 41.0
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.2e-35 156.0 392 40.1
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.2e-35 156.0 741 42.1
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 4.4e-35 154.1 761 40.6
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 7.6e-35 153.3 767 38.9
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.3e-34 152.5 276 38.4
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 4.9e-34 150.6 729 39.9
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.9e-33 148.7 734 36.2
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 3.2e-33 147.9 389 38.6
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 7.1e-33 146.7 763 43.3
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 2.1e-32 145.2 360 49.7
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 6.0e-32 143.7 770 41.2
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 2.3e-31 141.7 766 45.7
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 2.5e-30 138.3 761 40.6
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 9.6e-30 136.3 768 43.6
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.1e-29 135.2 165 52.7
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.4e-28 131.7 560 33.4
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 4.0e-28 131.0 721 45.5
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 9.0e-28 129.8 724 47.7
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 5.8e-27 127.1 727 36.5
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 2.2e-26 125.2 205 54.1
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 2.3e-23 115.2 731 41.9
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 2.0e-19 102.1 235 35.3
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.3e-18 99.4 762 40.4
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.9e-17 95.5 753 37.7
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.1e-16 92.0 254 29.5
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 8.7e-15 86.7 143 39.9
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.5e-14 85.9 401 32.9
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 1.2e-11 76.3 128 46.1
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.5e-11 75.9 89 52.8
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.8e-11 73.9 100 48.0
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.7e-10 72.4 138 39.1
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 2.9e-10 71.6 146 41.1
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 4.2e-09 67.8 114 39.5
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 2.3e-07 62.0 144 37.5
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 8.7e-07 60.1 177 30.5
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 5.7e-06 57.4 77 49.4


User provided reference genes

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