Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 3.9e-69 265.4 217 100.0
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 8.6e-61 237.7 217 76.0
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 5.6e-60 235.0 222 73.9
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 9.9e-57 224.2 222 75.2
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 1.6e-46 190.3 155 80.0
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.6e-46 190.3 152 82.2
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 2.7e-46 189.5 150 83.3
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.0e-45 187.6 150 83.3
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 3.9e-45 185.7 156 78.8
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 1.1e-44 184.1 154 78.6
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 1.5e-44 183.7 159 77.4
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 1.5e-44 183.7 159 77.4
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 1.5e-44 183.7 159 74.2
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 2.5e-44 183.0 159 78.6
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 5.6e-44 181.8 160 78.8
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 5.6e-44 181.8 159 81.1
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 3.6e-43 179.1 160 76.9
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.6e-43 179.1 160 77.5
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 3.6e-43 179.1 160 77.5
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 3.6e-43 179.1 160 77.5
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 8.1e-43 177.9 158 77.2
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 1.4e-42 177.2 147 75.5
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 1.8e-42 176.8 159 76.7
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 1.8e-42 176.8 159 76.7
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 1.8e-42 176.8 224 61.2
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 1.8e-42 176.8 155 78.7
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.4e-42 176.4 150 80.7
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 4.0e-42 175.6 150 76.7
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 5.3e-42 175.3 154 77.3
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 6.9e-42 174.9 160 76.9
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 9.0e-42 174.5 221 61.5
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 1.5e-41 173.7 159 76.1
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 1.5e-41 173.7 150 78.0
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 1.5e-41 173.7 156 75.6
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 1.5e-41 173.7 154 78.6
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 2.0e-41 173.3 156 73.1
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 2.6e-41 172.9 152 79.6
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 3.4e-41 172.6 161 76.4
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 3.4e-41 172.6 150 73.3
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 3.4e-41 172.6 166 75.3
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 4.5e-41 172.2 150 80.7
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 4.5e-41 172.2 152 78.9
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 5.8e-41 171.8 166 74.7
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 5.8e-41 171.8 164 75.6
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 7.6e-41 171.4 152 77.0
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 9.9e-41 171.0 152 78.3
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 9.9e-41 171.0 150 75.3
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 1.3e-40 170.6 150 76.7
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 8.4e-40 167.9 157 71.3
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 2.4e-39 166.4 157 73.2
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 2.4e-39 166.4 162 75.3
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 3.2e-39 166.0 150 78.7
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 3.2e-39 166.0 150 78.7
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.2e-39 166.0 152 77.6
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 3.2e-39 166.0 159 73.6
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 7.1e-39 164.9 144 64.6
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 7.1e-39 164.9 154 74.0
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 7.1e-39 164.9 153 73.9
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.2e-38 164.1 224 58.9
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 1.6e-38 163.7 159 71.7
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.6e-38 163.7 150 76.0
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 1.6e-38 163.7 150 76.0
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 2.1e-38 163.3 150 76.0
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 2.7e-38 162.9 214 58.9
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 7.9e-38 161.4 158 74.1
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 7.9e-38 161.4 160 72.5
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 1.3e-37 160.6 159 72.3
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 1.8e-37 160.2 154 76.0
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 2.3e-37 159.8 153 75.2
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 5.1e-37 158.7 159 74.8
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 1.1e-36 157.5 152 75.7
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.5e-36 157.1 151 74.2
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.5e-36 157.1 159 67.3
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 5.6e-36 155.2 147 76.2
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 7.4e-36 154.8 157 71.3
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 1.3e-35 154.1 151 74.8
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 1.6e-35 153.7 107 76.6
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 1.6e-35 153.7 152 61.8
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 4.8e-35 152.1 142 77.5
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 8.1e-35 151.4 107 75.7
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 1.1e-34 151.0 128 78.1
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 1.1e-34 151.0 150 72.7
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 1.8e-34 150.2 163 71.2
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 5.3e-34 148.7 154 71.4
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 3.4e-33 146.0 163 69.9
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 1.9e-31 140.2 217 53.0
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 8.7e-29 131.3 126 77.0
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.5e-28 130.6 150 67.3
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 5.7e-28 128.6 154 63.6
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 3.1e-26 122.9 151 64.2
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 5.3e-26 122.1 159 54.1
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 6.9e-26 121.7 151 62.9
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.2e-25 120.9 106 80.2
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 1.2e-25 120.9 151 62.9
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 2.2e-24 116.7 158 58.2
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 9.3e-23 111.3 108 80.6
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.2e-22 110.9 106 80.2
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 7.9e-22 108.2 76 76.3
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 3.3e-20 102.8 146 57.5
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.6e-19 100.5 107 76.6
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 1.4e-18 97.4 145 44.1
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 1.2e-17 94.4 158 51.3
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.0e-17 93.6 161 49.7
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.6e-17 93.2 105 48.6
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 7.7e-17 91.7 105 47.6
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 1.3e-16 90.9 142 34.5
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 3.0e-13 79.7 141 44.7
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 8.8e-13 78.2 81 55.6
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 2.6e-12 76.6 81 48.1
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 2.6e-12 76.6 60 66.7
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 4.5e-09 65.9 77 53.2
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 7.2e-07 58.5 72 56.9
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.1e-06 57.0 101 44.6
AUR62044181 Chenopodium quinoa HOM05D026575 ORTHO05D028765 2.1e-06 57.0 72 55.6
ATR0829G181 Amborella trichopoda HOM05D007100 ORTHO05D008958 4.7e-06 55.8 139 36.0


User provided reference genes

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