Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012166 Chenopodium quinoa HOM05D005780 ORTHO05D007289 4.8e-108 394.4 188 100.0
AUR62022803 Chenopodium quinoa HOM05D005780 ORTHO05D007289 1.3e-100 369.8 188 93.1
EL10Ac2g04667 Beta vulgaris HOM05D005780 ORTHO05D007289 6.8e-70 267.7 260 56.5
Sc14g0004720 Simmondsia chinensis HOM05D005780 ORTHO05D007289 2.2e-44 183.0 265 42.6
Hund13812 Selenicereus undatus HOM05D005780 ORTHO05D007289 4.9e-44 181.8 265 41.9
Ah.16g102800 Amaranthus hybridus HOM05D005780 ORTHO05D007289 3.0e-41 172.6 233 43.8
GSVIVG01016433001 Vitis vinifera HOM05D005780 ORTHO05D007289 9.5e-40 167.5 265 38.5
Atru.chr12.271 Acer truncatum HOM05D005780 ORTHO05D007289 3.1e-38 162.5 270 37.4
TAR623G0797 Trochodendron aralioides HOM05D005780 ORTHO05D007289 5.2e-38 161.8 266 37.6
Eucgr.J00968 Eucalyptus grandis HOM05D005780 ORTHO05D007289 1.5e-37 160.2 260 39.6
PSO339G4705 Papaver somniferum HOM05D005780 ORTHO05D007289 1.5e-37 160.2 273 35.2
Cpa.g.sc19.252 Carica papaya HOM05D005780 ORTHO05D007289 4.4e-37 158.7 280 36.4
Sed0012096 Sechium edule HOM05D005780 ORTHO05D007289 4.4e-37 158.7 279 36.2
PSO384G4288 Papaver somniferum HOM05D005780 ORTHO05D007289 7.5e-37 157.9 274 35.0
MD01G1142100 Malus domestica HOM05D005780 ORTHO05D007289 9.9e-37 157.5 259 38.2
CsaV3_6G001510 Cucumis sativus L. HOM05D005780 ORTHO05D007289 1.3e-36 157.1 280 37.5
Nn2g13534 Nelumbo nucifera HOM05D005780 ORTHO05D007289 3.7e-36 155.6 266 37.2
PGR044G2210 Punica granatum HOM05D005780 ORTHO05D007289 4.9e-36 155.2 273 35.5
Thecc.10G030600 Theobroma cacao HOM05D005780 ORTHO05D007289 1.1e-35 154.1 264 36.4
Gorai.011G274500 Gossypium raimondii HOM05D005780 ORTHO05D007289 1.4e-35 153.7 261 35.2
Gohir.A10G226300 Gossypium hirsutum HOM05D005780 ORTHO05D007289 2.4e-35 152.9 269 34.2
Gohir.D13G018600 Gossypium hirsutum HOM05D005780 ORTHO05D007289 3.2e-35 152.5 273 35.2
THA.LOC104823134 Tarenaya hassleriana HOM05D005780 ORTHO05D007289 3.2e-35 152.5 262 35.5
Duzib128G1582 Durio zibethinus HOM05D005780 ORTHO05D007289 5.4e-35 151.8 260 35.8
Prupe.2G243100 Prunus persica HOM05D005780 ORTHO05D007289 5.4e-35 151.8 275 34.9
Dinv16281 Davidia involucrata HOM05D005780 ORTHO05D007289 7.1e-35 151.4 266 36.1
Manes.07G122900 Manihot esculenta HOM05D005780 ORTHO05D007289 1.2e-34 150.6 268 36.9
Gohir.A13G017500 Gossypium hirsutum HOM05D005780 ORTHO05D007289 2.1e-34 149.8 276 34.4
FvH4_7g23620 Fragaria vesca HOM05D005780 ORTHO05D007289 6.0e-34 148.3 259 37.1
FAN03G3464 Fragaria x ananassa HOM05D005780 ORTHO05D007289 1.0e-33 147.5 259 37.1
Lj6g0000720 Lotus japonicus HOM05D005780 ORTHO05D007289 1.7e-33 146.7 264 37.1
Potri.008G062100 Populus trichocarpa HOM05D005780 ORTHO05D007289 5.1e-33 145.2 268 34.3
Glyma.18G032000 Glycine max HOM05D005780 ORTHO05D007289 1.1e-32 144.1 280 34.6
AL6G15850 Arabidopsis lyrata HOM05D005780 ORTHO05D007289 1.5e-32 143.7 266 35.7
COL.COLO4_25579 Corchorus olitorius HOM05D005780 ORTHO05D007289 1.5e-32 143.7 311 32.2
MD07G1207800 Malus domestica HOM05D005780 ORTHO05D007289 1.5e-32 143.7 257 36.6
Ca_17131_v3 Cicer arietinum L. HOM05D005780 ORTHO05D007289 1.9e-32 143.3 287 35.2
Aqoxy1G00787 Aquilegia oxysepala HOM05D005780 ORTHO05D007289 3.3e-32 142.5 259 35.1
FAN06G3968 Fragaria x ananassa HOM05D005780 ORTHO05D007289 3.3e-32 142.5 271 34.7
Lalb_Chr15g0084461 Lupinus albus HOM05D005780 ORTHO05D007289 3.3e-32 142.5 283 35.3
Sp6g36970 Schrenkiella parvula HOM05D005780 ORTHO05D007289 3.3e-32 142.5 261 34.9
Cfa001395 Carpinus fangiana HOM05D005780 ORTHO05D007289 4.3e-32 142.1 261 34.5
Gohir.D10G238600 Gossypium hirsutum HOM05D005780 ORTHO05D007289 4.3e-32 142.1 221 37.6
MSTRG.251 Avicennia marina HOM05D005780 ORTHO05D007289 7.3e-32 141.4 263 33.5
Carub.0006s0481 Capsella rubella HOM05D005780 ORTHO05D007289 1.2e-31 140.6 263 34.6
Glyma.11G225300 Glycine max HOM05D005780 ORTHO05D007289 1.2e-31 140.6 282 34.4
CAN.G115.6 Capsicum annuum HOM05D005780 ORTHO05D007289 2.1e-31 139.8 270 33.7
Aa31LG11G6960 Aethionema arabicum HOM05D005780 ORTHO05D007289 4.7e-31 138.7 281 32.7
TPR.G33709 Trifolium pratense HOM05D005780 ORTHO05D007289 4.7e-31 138.7 262 34.0
arahy.Tifrunner.gnm1.ann1.BF464R Arachis hypogaea HOM05D005780 ORTHO05D007289 6.2e-31 138.3 265 34.0
CANSAT56G3446 Cannabis sativa HOM05D005780 ORTHO05D007289 6.2e-31 138.3 264 34.8
Ciclev10032579m.g Citrus clementina HOM05D005780 ORTHO05D007289 6.2e-31 138.3 224 37.9
RcHm_v2.0_Chr1g0368881 Rosa chinensis HOM05D005780 ORTHO05D007289 6.2e-31 138.3 259 35.9
Rhsim09G0170100 Rhododendron simsii HOM05D005780 ORTHO05D007289 1.4e-30 137.1 293 32.8
MBI14_g02858_MAGBIO Magnolia biondii HOM05D005780 ORTHO05D007289 2.4e-30 136.3 261 35.6
Thhalv10014411m.g Eutrema salsugineum HOM05D005780 ORTHO05D007289 5.2e-30 135.2 263 34.2
HanXRQChr07g0202011 Helianthus annuus HOM05D005780 ORTHO05D007289 1.2e-29 134.0 262 34.7
Actinidia02380 Actinidia chinensis HOM05D005780 ORTHO05D007289 2.0e-29 133.3 260 33.5
Oeu018986.1 Olea europaea HOM05D005780 ORTHO05D007289 2.0e-29 133.3 262 32.4
Gohir.A10G226266 Gossypium hirsutum HOM05D005780 ORTHO05D007289 2.6e-29 132.9 211 37.0
DCAR_011758 Daucus carota HOM05D005780 ORTHO05D007289 3.4e-29 132.5 213 37.1
Haze_17154 Corylus avellana HOM05D005780 ORTHO05D007289 7.6e-29 131.3 297 31.3
Nitab4.5_0002822g0060 Nicotiana tabacum HOM05D005780 ORTHO05D007289 7.6e-29 131.3 260 33.5
Psat5g125560 Pisum sativum HOM05D005780 ORTHO05D007289 7.6e-29 131.3 216 38.0
Pp3c19_5660 Physcomitrium patens HOM05D005780 ORTHO05D007289 2.2e-28 129.8 217 37.3
Solyc03g079850.4 Solanum lycopersicum HOM05D005780 ORTHO05D007289 2.2e-28 129.8 266 32.0
Lsat_1_v5_gn_2_117001 Lactuca sativa HOM05D005780 ORTHO05D007289 2.9e-28 129.4 264 33.7
Sopen03g027310 Solanum pennellii HOM05D005780 ORTHO05D007289 3.8e-28 129.0 266 32.0
ECA238G2932 Erigeron canadensis HOM05D005780 ORTHO05D007289 1.1e-27 127.5 259 34.4
C09p70870 Brassica napus HOM05D005780 ORTHO05D007289 1.4e-27 127.1 263 32.7
BolC9t59846H Brassica oleracea HOM05D005780 ORTHO05D007289 1.4e-27 127.1 263 32.7
BcaC06g32303 Brassica carinata HOM05D005780 ORTHO05D007289 2.4e-27 126.3 264 32.6
Sabra08G0045700 Salix brachista HOM05D005780 ORTHO05D007289 3.2e-27 125.9 291 30.6
VMungo1383G0024 Vigna mungo HOM05D005780 ORTHO05D007289 3.2e-27 125.9 280 32.5
Lj8A74T69 Lonicera japonica HOM05D005780 ORTHO05D007289 4.1e-27 125.6 209 36.4
Lsat_1_v5_gn_9_63040 Lactuca sativa HOM05D005780 ORTHO05D007289 5.4e-27 125.2 263 32.7
Medtr3g069620 Medicago truncatula HOM05D005780 ORTHO05D007289 5.4e-27 125.2 262 32.4
MSTRG.8290 Avicennia marina HOM05D005780 ORTHO05D007289 1.2e-26 124.0 267 30.3
unitig_22.g6680 Utricularia gibba HOM05D005780 ORTHO05D007289 4.6e-26 122.1 262 30.9
HanXRQChr09g0246921 Helianthus annuus HOM05D005780 ORTHO05D007289 1.0e-25 120.9 264 31.8
Mapoly0001s0310 Marchantia polymorpha HOM05D005780 ORTHO05D007289 1.3e-25 120.6 220 35.0
Phvul.001G238600 Phaseolus vulgaris HOM05D005780 ORTHO05D007289 1.3e-25 120.6 263 32.7
SalBow6G1112 Salvia bowleyana HOM05D005780 ORTHO05D007289 3.9e-25 119.0 277 28.9
SalBow6G4646 Salvia bowleyana HOM05D005780 ORTHO05D007289 3.9e-25 119.0 277 28.9
arahy.Tifrunner.gnm1.ann1.Y0QE0E Arachis hypogaea HOM05D005780 ORTHO05D007289 1.1e-24 117.5 308 29.2
vmacro07012 Vaccinium macrocarpon HOM05D005780 ORTHO05D007289 3.3e-24 115.9 204 36.8
BraA10t45082Z Brassica rapa HOM05D005780 ORTHO05D007289 4.3e-24 115.5 283 30.0
Migut.F01304 Erythranthe guttata HOM05D005780 ORTHO05D007289 4.3e-24 115.5 266 30.5
ECA232G1234 Erigeron canadensis HOM05D005780 ORTHO05D007289 5.6e-24 115.2 266 32.0
vmacro10198 Vaccinium macrocarpon HOM05D005780 ORTHO05D007289 5.6e-24 115.2 311 28.6
Zm00001eb289450 Zea mays HOM05D005780 ORTHO05D007289 5.6e-24 115.2 259 34.7
Hma1.2p1_0039F.1_g024930 Hydrangea macrophylla HOM05D005780 ORTHO05D007289 9.6e-24 114.4 233 32.6
Sed0009457 Sechium edule HOM05D005780 ORTHO05D007289 1.6e-23 113.6 92 59.8
CiPaw.01G293600 Carya illinoinensis HOM05D005780 ORTHO05D007289 1.1e-22 110.9 76 69.7
QL08p062087 Quercus lobata HOM05D005780 ORTHO05D007289 1.4e-22 110.5 233 32.2
Duzib114G0105 Durio zibethinus HOM05D005780 ORTHO05D007289 6.9e-22 108.2 76 67.1
AagrBONN_evm.TU.Sc2ySwM_362.219 Anthoceros agrestis HOM05D005780 ORTHO05D007289 1.2e-21 107.5 213 31.9
Peaxi162Scf00140g01357 Petunia axillaris HOM05D005780 ORTHO05D007289 1.2e-21 107.5 235 30.6
Gorai.013G020600 Gossypium raimondii HOM05D005780 ORTHO05D007289 1.5e-21 107.1 235 30.6
MELO3C008260.2 Cucumis melo HOM05D005780 ORTHO05D007289 5.8e-21 105.1 76 64.5
Eucgr.I02190 Eucalyptus grandis HOM05D005780 ORTHO05D007289 7.6e-21 104.8 75 68.0
Eucgr.L02372 Eucalyptus grandis HOM05D005780 ORTHO05D007289 9.9e-21 104.4 74 67.6
Cc02_g07200 Coffea canephora HOM05D005780 ORTHO05D007289 3.8e-20 102.4 76 61.8
SGA_v2.0_scaffold76G25041 Striga asiatica HOM05D005780 ORTHO05D007289 8.4e-20 101.3 76 67.1
Zm00001eb412440 Zea mays HOM05D005780 ORTHO05D007289 8.4e-20 101.3 208 35.6
Actinidia13899 Actinidia chinensis HOM05D005780 ORTHO05D007289 1.9e-19 100.1 154 40.9
ATR0210G010 Amborella trichopoda HOM05D005780 ORTHO05D007289 2.4e-19 99.8 70 65.7
ClCG11G006480 Citrullus lanatus HOM05D005780 ORTHO05D007289 9.3e-19 97.8 112 47.3
HPP92_015198 Vanilla planifolia HOM05D005780 ORTHO05D007289 9.3e-19 97.8 206 32.5
THA.LOC104816572 Tarenaya hassleriana HOM05D005780 ORTHO05D007289 1.2e-18 97.4 74 63.5
Pp3c22_3300 Physcomitrium patens HOM05D005780 ORTHO05D007289 1.6e-18 97.1 85 57.6
CDE02G3808 Ceratophyllum demersum HOM05D005780 ORTHO05D007289 1.3e-17 94.0 72 61.1
SMO134G0044 Selaginella moellendorffii HOM05D005780 ORTHO05D007289 1.3e-17 94.0 207 31.9
DCAR_024851 Daucus carota HOM05D005780 ORTHO05D007289 3.0e-17 92.8 117 38.5
FAN10G2246 Fragaria x ananassa HOM05D005780 ORTHO05D007289 8.7e-17 91.3 99 48.5
Hma1.2p1_0039F.1_g024940 Hydrangea macrophylla HOM05D005780 ORTHO05D007289 1.1e-16 90.9 180 31.7
FAN01G2814 Fragaria x ananassa HOM05D005780 ORTHO05D007289 1.5e-16 90.5 94 48.9
CARHR207290 Cardamine hirsuta HOM05D005780 ORTHO05D007289 1.9e-16 90.1 99 44.4
FAN06G4825 Fragaria x ananassa HOM05D005780 ORTHO05D007289 1.9e-16 90.1 99 47.5
Dinv34450 Davidia involucrata HOM05D005780 ORTHO05D007289 9.6e-16 87.8 98 44.9
AT5G05930 Arabidopsis thaliana HOM05D005780 ORTHO05D007289 4.8e-15 85.5 100 43.0
CDE02G3151 Ceratophyllum demersum HOM05D005780 ORTHO05D007289 1.2e-13 80.9 85 48.2
Zm00001eb265730 Zea mays HOM05D003504 ORTHO05D004006 4.5e-13 79.0 55 67.3
ClCG11G006490 Citrullus lanatus HOM05D005780 ORTHO05D007289 7.6e-13 78.2 131 38.2
Cre10.g457450 Chlamydomonas reinhardtii HOM05D005780 ORTHO05D007289 2.9e-12 76.3 128 34.4
Nitab4.5_0000399g0020 Nicotiana tabacum HOM05D005780 ORTHO05D007289 4.9e-12 75.5 46 71.7
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea HOM05D005780 ORTHO05D006545 6.4e-12 75.1 98 40.8
MCO05G626 Micromonas commoda HOM05D005780 ORTHO05D007289 6.0e-10 68.6 62 51.6
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 1.8e-09 67.0 53 52.8
Os05g0453500 Oryza sativa ssp. japonica HOM05D005780 ORTHO05D007289 4.3e-08 62.4 93 38.7
Zm00001eb226980 Zea mays HOM05D005780 ORTHO05D007289 4.3e-08 62.4 186 30.1
Zm00001eb137070 Zea mays HOM05D005780 ORTHO05D007289 1.1e-06 57.8 48 56.2
PRCOL_00006562 Prasinoderma coloniale HOM05D005780 ORTHO05D007289 1.4e-06 57.4 57 49.1


User provided reference genes

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