Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 8.5e-118 427.2 239 100.0
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.2e-105 386.0 239 91.6
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 3.7e-97 358.6 223 90.1
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 1.7e-86 323.2 239 76.2
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.6e-74 282.7 239 70.3
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.5e-61 239.6 168 85.1
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 8.3e-57 224.6 239 54.8
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 5.4e-48 195.3 251 49.0
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 2.3e-46 189.9 251 47.8
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 3.9e-46 189.1 243 46.1
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 3.9e-46 189.1 243 46.1
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 2.4e-43 179.9 250 44.4
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.5e-42 177.2 251 46.2
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 2.0e-42 176.8 243 44.9
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 2.6e-42 176.4 249 43.4
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 2.6e-42 176.4 249 45.0
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 3.4e-42 176.0 245 46.1
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 9.9e-42 174.5 249 45.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.3e-41 174.1 245 46.1
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 2.2e-41 173.3 248 45.6
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 2.2e-41 173.3 250 42.0
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 2.9e-41 172.9 249 43.8
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.9e-41 172.2 244 44.7
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 6.4e-41 171.8 247 41.7
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 6.4e-41 171.8 244 45.9
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 1.1e-40 171.0 251 43.0
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.1e-40 171.0 253 44.3
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.9e-40 170.2 243 45.3
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 3.2e-40 169.5 247 41.7
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 5.4e-40 168.7 253 43.9
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 7.1e-40 168.3 247 40.9
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 7.1e-40 168.3 247 41.7
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 7.1e-40 168.3 251 43.0
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 7.1e-40 168.3 251 44.6
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 9.3e-40 167.9 251 44.2
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 1.2e-39 167.5 247 40.5
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 1.2e-39 167.5 249 43.8
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 2.1e-39 166.8 249 43.4
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 2.1e-39 166.8 243 44.0
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 6.0e-39 165.2 247 40.9
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 1.0e-38 164.5 250 43.2
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 1.0e-38 164.5 246 44.3
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 1.7e-38 163.7 242 42.6
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.3e-38 163.3 249 41.0
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 2.3e-38 163.3 295 39.3
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 3.0e-38 162.9 247 40.5
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 5.1e-38 162.2 251 42.6
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 5.1e-38 162.2 251 41.0
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 6.6e-38 161.8 244 43.9
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 1.1e-37 161.0 240 44.2
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 3.3e-37 159.5 245 40.8
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 5.6e-37 158.7 250 40.8
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 5.6e-37 158.7 241 41.1
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.6e-37 158.7 246 43.1
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 9.6e-37 157.9 251 43.4
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 2.1e-36 156.8 265 37.7
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.1e-36 156.8 249 44.2
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 1.4e-35 154.1 247 39.7
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.8e-35 153.7 228 43.0
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 2.4e-35 153.3 234 43.6
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 3.1e-35 152.9 249 41.4
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 9.0e-35 151.4 260 40.8
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 1.2e-34 151.0 228 42.5
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 2.0e-34 150.2 270 41.1
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 3.2e-32 142.9 247 38.1
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 4.2e-32 142.5 251 37.5
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 9.3e-32 141.4 244 39.8
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 1.3e-30 137.5 251 39.4
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 5.1e-30 135.6 249 39.0
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.1e-29 134.4 214 41.6
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 7.4e-29 131.7 247 38.5
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 1.3e-28 131.0 281 36.3
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 1.6e-28 130.6 246 34.6
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 2.1e-28 130.2 251 38.6
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 6.2e-28 128.6 230 39.6
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.4e-27 126.7 276 33.7
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 3.1e-27 126.3 246 37.4
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 5.3e-27 125.6 202 41.1
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 2.6e-26 123.2 266 32.3
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 3.4e-26 122.9 264 37.5
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.2e-23 114.4 188 40.4
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 3.9e-22 109.4 200 38.5
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 5.1e-22 109.0 195 39.0
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 8.2e-20 101.7 156 42.3
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 4.0e-19 99.4 125 44.8
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 5.3e-19 99.0 125 46.4
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 9.0e-19 98.2 147 46.3
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 2.6e-18 96.7 165 42.4
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 2.7e-15 86.7 122 47.5
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 4.6e-15 85.9 120 47.5
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 7.4e-13 78.6 118 43.2
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 1.8e-11 73.9 76 53.9
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 2.9e-09 66.6 258 25.6
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 1.6e-07 60.8 92 40.2
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 7.9e-07 58.5 55 54.5
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 1.0e-06 58.2 97 40.2
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 2.3e-06 57.0 244 25.8


User provided reference genes

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