Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 6.5e-97 357.5 189 100.0
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.4e-94 349.7 189 96.8
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 3.5e-90 335.1 189 91.5
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 1.1e-80 303.5 191 82.7
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 5.7e-77 291.2 189 81.0
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 9.8e-77 290.4 188 81.9
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 1.7e-76 289.7 194 79.9
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 1.7e-76 289.7 190 78.9
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 1.7e-76 289.7 190 78.9
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 1.7e-76 289.7 190 78.9
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 2.2e-76 289.3 197 77.7
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 2.8e-76 288.9 194 77.3
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 6.3e-76 287.7 189 79.4
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.1e-75 287.0 194 77.3
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 1.1e-75 287.0 194 78.4
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.1e-75 287.0 189 78.3
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.4e-75 286.6 189 79.9
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 3.1e-75 285.4 189 77.8
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 7.0e-75 284.3 190 77.4
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 9.2e-75 283.9 189 79.9
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 1.2e-74 283.5 198 76.3
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.0e-74 282.7 193 77.7
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 2.0e-74 282.7 197 76.1
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.7e-74 282.3 189 79.9
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 3.5e-74 282.0 188 80.9
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 4.5e-74 281.6 189 79.9
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 4.5e-74 281.6 189 79.9
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 7.8e-74 280.8 189 78.3
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 7.8e-74 280.8 191 77.5
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 7.8e-74 280.8 191 78.0
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 7.8e-74 280.8 191 78.0
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 1.0e-73 280.4 188 77.1
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 1.0e-73 280.4 189 79.4
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 1.0e-73 280.4 190 78.9
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 1.3e-73 280.0 188 77.7
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 1.3e-73 280.0 188 77.1
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 1.3e-73 280.0 191 78.0
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.3e-73 280.0 188 77.7
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.3e-73 280.0 189 76.2
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 1.7e-73 279.6 192 77.6
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.7e-73 279.6 189 78.8
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 1.7e-73 279.6 191 77.5
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 2.9e-73 278.9 189 78.3
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 2.9e-73 278.9 193 76.7
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 2.9e-73 278.9 191 77.5
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 2.9e-73 278.9 191 77.0
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 5.0e-73 278.1 189 78.3
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 5.0e-73 278.1 189 75.7
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 5.0e-73 278.1 189 77.8
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 6.6e-73 277.7 189 78.3
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 6.6e-73 277.7 190 78.9
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.1e-72 276.9 189 77.8
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 1.1e-72 276.9 186 78.0
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 1.1e-72 276.9 189 78.3
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 1.1e-72 276.9 188 77.1
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.5e-72 276.6 189 77.8
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 2.5e-72 275.8 197 75.6
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 2.5e-72 275.8 188 78.2
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 3.3e-72 275.4 189 77.2
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 3.3e-72 275.4 189 77.8
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 3.3e-72 275.4 189 77.2
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 4.3e-72 275.0 188 78.2
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 4.3e-72 275.0 193 76.7
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 4.3e-72 275.0 197 75.6
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 5.6e-72 274.6 189 76.2
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 5.6e-72 274.6 189 77.2
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 7.3e-72 274.2 190 76.3
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 9.5e-72 273.9 189 76.2
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 9.5e-72 273.9 186 76.9
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 1.2e-71 273.5 186 78.0
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 1.6e-71 273.1 186 78.0
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 2.1e-71 272.7 186 78.5
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 2.1e-71 272.7 186 78.0
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 2.8e-71 272.3 186 78.0
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 3.6e-71 271.9 186 78.0
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 3.6e-71 271.9 186 78.0
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 4.7e-71 271.6 186 77.4
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 4.7e-71 271.6 195 74.9
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 6.1e-71 271.2 187 77.0
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 6.1e-71 271.2 186 78.0
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 6.1e-71 271.2 185 76.8
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 1.0e-70 270.4 187 74.9
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.4e-70 270.0 188 76.1
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 3.1e-70 268.9 188 75.5
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 5.2e-70 268.1 186 76.3
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 5.2e-70 268.1 185 76.8
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 7.5e-69 264.2 189 76.2
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 2.4e-67 259.2 171 78.4
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 2.4e-67 259.2 191 75.4
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 3.5e-66 255.4 190 72.6
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 3.5e-66 255.4 190 72.6
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 6.6e-65 251.1 184 73.4
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 8.6e-65 250.8 184 71.7
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 2.5e-64 249.2 179 73.2
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 7.3e-64 247.7 197 65.0
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 3.6e-63 245.4 190 70.5
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 6.2e-63 244.6 190 70.0
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 8.0e-63 244.2 187 67.9
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 1.8e-62 243.0 184 71.7
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 4.0e-62 241.9 174 74.7
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 6.8e-62 241.1 179 72.6
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 7.5e-61 237.7 184 66.8
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 5.4e-59 231.5 196 64.3
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 1.2e-58 230.3 198 62.6
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 4.6e-58 228.4 189 63.5
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 1.9e-56 223.0 206 59.7
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 5.2e-54 214.9 180 63.3
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 5.4e-51 204.9 135 76.3
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 2.7e-50 202.6 183 55.2
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 1.5e-48 196.8 192 62.0
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 5.6e-48 194.9 127 79.5
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 6.2e-47 191.4 201 56.2
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 1.8e-46 189.9 163 65.0
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 8.9e-46 187.6 135 72.6
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.2e-42 177.2 189 55.6
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 6.2e-39 164.9 194 50.0
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.5e-37 160.2 117 75.2
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 2.6e-37 159.5 101 74.3
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 2.1e-34 149.8 102 74.5
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 3.9e-33 145.6 123 65.0
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 1.5e-32 143.7 163 44.8
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 1.8e-25 120.2 88 67.0
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 3.0e-25 119.4 74 90.5
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 5.1e-25 118.6 135 54.8
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 5.1e-25 118.6 107 60.7
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 4.8e-23 112.1 107 57.9
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 2.2e-20 103.2 79 70.9
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 5.5e-19 98.6 171 35.1
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 4.3e-16 89.0 70 68.6
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 8.2e-15 84.7 158 32.9
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 9.0e-14 81.3 44 81.8
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 2.3e-09 66.6 43 69.8


User provided reference genes

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