Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011661 Chenopodium quinoa HOM05D001219 ORTHO05D001017 7.5e-65 250.4 126 100.0
AUR62016485 Chenopodium quinoa HOM05D001219 ORTHO05D001017 1.4e-55 219.5 124 91.1
AUR62016484 Chenopodium quinoa HOM05D001219 ORTHO05D001017 3.5e-54 214.9 124 87.9
AUR62016289 Chenopodium quinoa HOM05D001219 ORTHO05D001017 9.2e-47 190.3 124 75.0
AUR62016295 Chenopodium quinoa HOM05D001219 ORTHO05D001017 9.2e-47 190.3 124 75.0
AUR62016288 Chenopodium quinoa HOM05D001219 ORTHO05D001017 5.0e-45 184.5 124 75.8
AUR62040410 Chenopodium quinoa HOM05D001219 ORTHO05D001017 2.3e-42 175.6 124 70.2
AUR62011479 Chenopodium quinoa HOM05D001219 ORTHO05D001017 9.8e-41 170.2 143 62.9
AUR62016291 Chenopodium quinoa HOM05D001219 ORTHO05D001017 5.1e-37 157.9 124 62.9
AUR62016292 Chenopodium quinoa HOM05D001219 ORTHO05D001017 1.3e-32 143.3 124 58.1
AUR62011478 Chenopodium quinoa HOM05D001219 ORTHO05D001017 4.6e-30 134.8 87 72.4
EL10Ac8g20424 Beta vulgaris HOM05D001219 ORTHO05D001017 4.3e-28 128.3 124 57.3
AUR62011485 Chenopodium quinoa HOM05D001219 ORTHO05D001017 6.6e-21 104.4 78 62.8
AUR62011476 Chenopodium quinoa HOM05D001219 ORTHO05D001017 1.9e-20 102.8 124 48.4
AUR62016290 Chenopodium quinoa HOM05D001219 ORTHO05D001017 8.1e-19 97.4 67 70.1
AUR62011481 Chenopodium quinoa HOM05D001219 ORTHO05D001017 1.2e-17 93.6 59 78.0
AUR62016323 Chenopodium quinoa HOM05D001219 ORTHO05D001017 4.4e-17 91.7 65 70.8
AUR62040408 Chenopodium quinoa HOM05D001219 ORTHO05D001017 1.7e-16 89.7 74 58.1
Nn8g39731 Nelumbo nucifera HOM05D001219 ORTHO05D001017 2.1e-14 82.8 111 43.2
Duzib235G0909 Durio zibethinus HOM05D001219 ORTHO05D001017 2.7e-14 82.4 126 39.7
Actinidia25444 Actinidia chinensis HOM05D001219 ORTHO05D001017 6.0e-14 81.3 115 44.3
Ciclev10027319m.g Citrus clementina HOM05D001219 ORTHO05D001017 1.0e-13 80.5 126 42.1
Hma1.2p1_0135F.1_g061780 Hydrangea macrophylla HOM05D001219 ORTHO05D001017 1.3e-13 80.1 112 47.3
Medtr4g009030 Medicago truncatula HOM05D001219 ORTHO05D001017 2.3e-13 79.3 109 44.0
Sc25g0001130 Simmondsia chinensis HOM05D001219 ORTHO05D001017 2.3e-13 79.3 111 40.5
CAN.G407.41 Capsicum annuum HOM05D001219 ORTHO05D001017 3.0e-13 79.0 114 40.4
TAR636G1678 Trochodendron aralioides HOM05D001219 ORTHO05D001017 3.0e-13 79.0 112 40.2
Lj3g0021602 Lotus japonicus HOM05D001219 ORTHO05D001017 3.9e-13 78.6 110 44.5
PGSC0003DMG400014130 Solanum tuberosum HOM05D001219 ORTHO05D001017 5.1e-13 78.2 115 41.7
COL.COLO4_26644 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.1e-12 77.0 126 39.7
Nitab4.5_0008673g0010 Nicotiana tabacum HOM05D001219 ORTHO05D001017 1.1e-12 77.0 116 38.8
Haze_16652 Corylus avellana HOM05D001219 ORTHO05D001017 2.5e-12 75.9 110 40.0
Rhsim06G0134500 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.5e-12 75.9 114 45.6
RhsimUnG0244000 Rhododendron simsii HOM05D001219 ORTHO05D001017 3.3e-12 75.5 107 43.9
Sopen03g036110 Solanum pennellii HOM05D001219 ORTHO05D001017 3.3e-12 75.5 114 39.5
ClCG09G003210 Citrullus lanatus HOM05D001219 ORTHO05D001017 4.3e-12 75.1 106 42.5
Thecc.06G037400 Theobroma cacao HOM05D001219 ORTHO05D001017 5.6e-12 74.7 126 37.3
Cpa.g.sc10.120 Carica papaya HOM05D001219 ORTHO05D001017 7.4e-12 74.3 127 36.2
Cfa001905 Carpinus fangiana HOM05D001219 ORTHO05D001017 7.4e-12 74.3 110 39.1
COL.COLO4_20761 Corchorus olitorius HOM05D001219 ORTHO05D001017 9.6e-12 73.9 114 46.5
Lj9P496T46 Lonicera japonica HOM05D001219 ORTHO05D001017 1.6e-11 73.2 103 44.7
Nitab4.5_0005934g0020 Nicotiana tabacum HOM05D001219 ORTHO05D001017 1.6e-11 73.2 116 37.1
Potri.003G179100 Populus trichocarpa HOM05D001219 ORTHO05D001017 4.8e-11 71.6 110 42.7
TWI75G0494 Tripterygium wilfordii HOM05D001219 ORTHO05D001017 4.8e-11 71.6 127 37.0
Glyma.07G026200 Glycine max HOM05D001219 ORTHO05D001017 6.2e-11 71.2 110 40.9
COL.COLO4_08738 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.1e-11 70.9 124 38.7
Peaxi162Scf00332g00225 Petunia axillaris HOM05D001219 ORTHO05D001017 1.1e-10 70.5 113 38.1
Gorai.009G125600 Gossypium raimondii HOM05D001219 ORTHO05D001017 1.4e-10 70.1 126 37.3
COL.COLO4_31467 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.8e-10 69.7 104 42.3
Gohir.D05G122100 Gossypium hirsutum HOM05D001219 ORTHO05D001017 1.8e-10 69.7 126 37.3
QL05p034226 Quercus lobata HOM05D001219 ORTHO05D001017 1.8e-10 69.7 98 43.9
Thecc.06G037100 Theobroma cacao HOM05D001219 ORTHO05D001017 1.8e-10 69.7 109 38.5
Duzib106G1928 Durio zibethinus HOM05D001219 ORTHO05D001017 2.4e-10 69.3 111 37.8
CAN.G407.40 Capsicum annuum HOM05D001219 ORTHO05D001017 3.1e-10 68.9 115 40.0
arahy.Tifrunner.gnm1.ann1.P2NKR4 Arachis hypogaea HOM05D001219 ORTHO05D001017 4.0e-10 68.6 123 38.2
arahy.Tifrunner.gnm1.ann1.T7YMEL Arachis hypogaea HOM05D001219 ORTHO05D001017 4.0e-10 68.6 123 39.0
CiPaw.01G252300 Carya illinoinensis HOM05D001219 ORTHO05D001017 5.3e-10 68.2 112 38.4
CsaV3_7G032020 Cucumis sativus L. HOM05D001219 ORTHO05D001017 5.3e-10 68.2 98 42.9
TWI12G1478 Tripterygium wilfordii HOM05D001219 ORTHO05D001017 5.3e-10 68.2 127 33.9
Lalb_Chr25g0279201 Lupinus albus HOM05D001219 ORTHO05D001017 6.9e-10 67.8 97 45.4
COL.COLO4_31329 Corchorus olitorius HOM05D001219 ORTHO05D001017 9.0e-10 67.4 128 39.8
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 1.2e-09 67.0 110 39.1
Manes.04G105600 Manihot esculenta HOM05D001219 ORTHO05D001017 1.2e-09 67.0 127 35.4
VMungo0331G0565 Vigna mungo HOM05D001219 ORTHO05D001017 1.2e-09 67.0 98 43.9
AL2G40810 Arabidopsis lyrata HOM05D001219 ORTHO05D001017 1.5e-09 66.6 115 39.1
Phvul.010G159100 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 1.5e-09 66.6 98 44.9
Psat7g258680 Pisum sativum HOM05D001219 ORTHO05D001017 1.5e-09 66.6 109 40.4
COL.COLO4_09972 Corchorus olitorius HOM05D001219 ORTHO05D001017 2.0e-09 66.2 112 40.2
Rhsim06G0127200 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.0e-09 66.2 109 40.4
COL.COLO4_31487 Corchorus olitorius HOM05D000300 ORTHO05D000383 2.6e-09 65.9 114 41.2
Duzib106G0373 Durio zibethinus HOM05D001219 ORTHO05D001017 2.6e-09 65.9 110 40.9
RhsimUnG0244100 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.6e-09 65.9 112 42.0
vmacro12363 Vaccinium macrocarpon HOM05D001219 ORTHO05D001017 2.6e-09 65.9 113 43.4
CANSAT56G1867 Cannabis sativa HOM05D001219 ORTHO05D001017 3.4e-09 65.5 97 41.2
THA.LOC104812449 Tarenaya hassleriana HOM05D001219 ORTHO05D001017 3.4e-09 65.5 125 36.0
AT1G80630 Arabidopsis thaliana HOM05D001219 ORTHO05D001017 4.5e-09 65.1 115 38.3
Duzib106G0099 Durio zibethinus HOM05D001219 ORTHO05D001017 7.6e-09 64.3 99 40.4
arahy.Tifrunner.gnm1.ann1.F6HDT7 Arachis hypogaea HOM05D001219 ORTHO05D001017 1.3e-08 63.5 109 37.6
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 1.3e-08 63.5 109 37.6
Lj3g0021238 Lotus japonicus HOM05D001219 ORTHO05D001017 1.3e-08 63.5 109 37.6
Sabra03G0131300 Salix brachista HOM05D001219 ORTHO05D001017 1.3e-08 63.5 110 37.3
Ca_28544_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.7e-08 63.2 110 37.3
RcHm_v2.0_Chr2g0133501 Rosa chinensis HOM05D001219 ORTHO05D001017 1.7e-08 63.2 109 39.4
Rhsim06G0127300 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.2e-08 62.8 134 34.3
Rhsim06G0127600 Rhododendron simsii HOM05D001219 ORTHO05D001017 2.2e-08 62.8 108 43.5
Sed0011616 Sechium edule HOM05D001219 ORTHO05D001017 2.2e-08 62.8 114 39.5
Atru.chr10.2383 Acer truncatum HOM05D001219 ORTHO05D001017 4.9e-08 61.6 110 37.3
Ca_30910_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 4.9e-08 61.6 110 37.3
COL.COLO4_03340 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.4e-08 60.8 117 35.9
COL.COLO4_22355 Corchorus olitorius HOM05D001219 ORTHO05D001017 8.4e-08 60.8 112 38.4
FAN05G1445 Fragaria x ananassa HOM05D001219 ORTHO05D001017 1.1e-07 60.5 121 35.5
Nitab4.5_0002046g0080 Nicotiana tabacum HOM05D001219 ORTHO05D001017 1.1e-07 60.5 105 36.2
FAN09G4190 Fragaria x ananassa HOM05D001219 ORTHO05D001017 1.9e-07 59.7 105 39.0
FvH4_6g28940 Fragaria vesca HOM05D001219 ORTHO05D001017 3.2e-07 58.9 105 38.1
FAN14G5953 Fragaria x ananassa HOM05D001219 ORTHO05D001017 3.2e-07 58.9 105 38.1
FAN02G1796 Fragaria x ananassa HOM05D001219 ORTHO05D001017 4.2e-07 58.5 105 38.1
Lj3g0011098 Lotus japonicus HOM05D001219 ORTHO05D001017 4.2e-07 58.5 110 37.3
Duzib106G0874 Durio zibethinus HOM05D001219 ORTHO05D001017 5.5e-07 58.2 99 38.4
Lsat_1_v5_gn_4_86000 Lactuca sativa HOM05D001219 ORTHO05D001017 7.1e-07 57.8 108 38.0
ATR0629G134 Amborella trichopoda HOM05D001219 ORTHO05D001017 9.3e-07 57.4 130 32.3
CSS0049276 Camellia sinensis var. sinensis HOM05D001219 ORTHO05D001017 1.2e-06 57.0 107 36.4
Eucgr.F03944 Eucalyptus grandis HOM05D001219 ORTHO05D001017 1.2e-06 57.0 109 33.9
CSS0005671 Camellia sinensis var. sinensis HOM05D001219 ORTHO05D001017 1.6e-06 56.6 107 37.4
CSS0032623 Camellia sinensis var. sinensis HOM05D001219 ORTHO05D001017 2.1e-06 56.2 107 36.4
Thhalv10018340m.g Eutrema salsugineum HOM05D001219 ORTHO05D001017 2.1e-06 56.2 116 37.1
Carub.0002s2711 Capsella rubella HOM05D001219 ORTHO05D001017 3.5e-06 55.5 113 36.3
BolC6t40404H Brassica oleracea HOM05D001219 ORTHO05D001017 4.6e-06 55.1 93 38.7
DCAR_016288 Daucus carota HOM05D001219 ORTHO05D001017 4.6e-06 55.1 128 32.0
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 4.6e-06 55.1 114 36.0
TPR.G1358 Trifolium pratense HOM05D001219 ORTHO05D001017 6.0e-06 54.7 100 37.0
TPR.G29733 Trifolium pratense HOM05D001219 ORTHO05D001017 6.0e-06 54.7 89 38.2
C06p53900 Brassica napus HOM05D001219 ORTHO05D001017 7.9e-06 54.3 113 35.4
Medtr4g006450 Medicago truncatula HOM05D001219 ORTHO05D001017 7.9e-06 54.3 71 43.7


User provided reference genes

Program Settings