Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.1e-44 181.0 93 100.0
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.1e-44 181.0 93 100.0
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.3e-39 165.2 107 84.1
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 5.8e-38 160.6 87 93.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.9e-37 158.3 85 92.9
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 5.4e-36 154.1 90 85.6
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.2e-35 152.9 87 87.4
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.2e-35 152.9 87 87.4
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.6e-35 152.5 89 86.5
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.0e-35 152.1 87 86.2
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 2.0e-35 152.1 87 85.1
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 2.0e-35 152.1 87 85.1
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.7e-35 151.8 89 84.3
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 2.7e-35 151.8 88 85.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 2.7e-35 151.8 87 86.2
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 3.5e-35 151.4 90 86.7
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 4.6e-35 151.0 80 93.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 4.6e-35 151.0 85 87.1
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 6.0e-35 150.6 87 85.1
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.0e-35 150.6 86 84.9
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 6.0e-35 150.6 87 87.4
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 7.8e-35 150.2 86 87.2
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.0e-34 149.8 84 86.9
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.0e-34 149.8 87 82.8
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.3e-34 149.4 88 85.2
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 1.3e-34 149.4 87 82.8
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.7e-34 149.1 83 88.0
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.7e-34 149.1 89 86.5
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 2.3e-34 148.7 82 90.2
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.3e-34 148.7 88 85.2
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 2.3e-34 148.7 86 89.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.0e-34 148.3 86 83.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.9e-34 147.9 83 85.5
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.0e-34 147.5 84 88.1
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 5.0e-34 147.5 84 88.1
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 5.0e-34 147.5 84 88.1
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 6.6e-34 147.1 92 78.3
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 6.6e-34 147.1 84 84.5
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.1e-33 146.4 81 87.7
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.1e-33 146.4 92 81.5
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.5e-33 146.0 85 84.7
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.9e-33 145.6 87 80.5
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.5e-33 145.2 89 85.4
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 3.3e-33 144.8 89 82.0
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 3.3e-33 144.8 86 80.2
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 3.3e-33 144.8 85 83.5
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 4.3e-33 144.4 86 86.0
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 7.3e-33 143.7 84 83.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 9.5e-33 143.3 82 85.4
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 9.5e-33 143.3 86 81.4
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 9.5e-33 143.3 85 83.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.2e-32 142.9 88 80.7
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.1e-32 142.1 82 85.4
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.1e-32 142.1 82 86.6
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 2.1e-32 142.1 94 81.9
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 3.6e-32 141.4 82 87.8
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 4.7e-32 141.0 94 78.7
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 8.1e-32 140.2 86 79.1
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.1e-31 139.8 89 75.3
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.1e-31 139.8 85 80.0
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.1e-31 139.8 85 80.0
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.4e-31 139.4 83 86.7
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.4e-31 139.4 81 82.7
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.8e-31 139.0 86 76.7
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.8e-31 139.0 86 80.2
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.1e-31 138.3 90 75.6
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.1e-31 138.3 90 75.6
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 3.1e-31 138.3 86 77.9
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 3.1e-31 138.3 112 67.9
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.0e-31 137.9 83 75.9
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 6.8e-31 137.1 83 79.5
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 6.8e-31 137.1 90 74.4
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 6.8e-31 137.1 81 84.0
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 6.8e-31 137.1 84 79.8
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 8.9e-31 136.7 83 81.9
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 2.6e-30 135.2 75 88.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-30 135.2 89 73.0
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.6e-30 135.2 89 73.0
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.6e-30 135.2 89 73.0
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 3.4e-30 134.8 89 75.3
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 3.4e-30 134.8 74 86.5
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.4e-30 134.4 85 77.6
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 5.8e-30 134.0 83 77.1
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 9.8e-30 133.3 83 77.1
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.3e-29 132.9 83 80.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-29 132.5 78 80.8
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.7e-29 132.5 83 77.1
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.7e-29 132.5 82 78.0
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.9e-29 131.7 93 73.1
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.4e-29 130.6 83 80.7
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.4e-29 130.6 91 70.3
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.4e-28 129.4 97 71.1
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 3.2e-28 128.3 90 70.0
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 3.2e-28 128.3 90 70.0
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 3.2e-28 128.3 90 70.0
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 3.2e-28 128.3 90 70.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 7.1e-28 127.1 90 68.9
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 7.1e-28 127.1 90 68.9
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.2e-27 126.3 77 77.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.6e-27 125.9 71 88.7
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-27 125.6 75 80.0
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.1e-27 125.6 112 62.5
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.7e-27 125.2 70 88.6
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 4.6e-27 124.4 84 73.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.0e-27 124.0 91 67.0
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 2.3e-26 122.1 74 87.8
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.9e-26 121.3 70 85.7
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 3.9e-26 121.3 92 63.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 5.1e-26 120.9 66 89.4
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.1e-25 119.8 72 86.1
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.6e-24 115.9 70 87.1
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 4.7e-24 114.4 74 74.3
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 4.7e-24 114.4 73 75.3
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.1e-23 111.7 66 80.3
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 4.0e-23 111.3 63 84.1
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.0e-23 111.3 68 79.4
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 2.0e-22 109.0 69 78.3
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.9e-20 102.4 74 70.3
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 7.1e-20 100.5 88 64.8
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.6e-19 99.4 82 62.2
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.0e-18 96.7 83 63.9
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 1.4e-15 86.3 84 54.8
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 5.2e-15 84.3 54 79.6
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 3.4e-14 81.6 87 47.1
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.4e-14 81.3 51 78.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 7.6e-14 80.5 47 80.9
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.3e-10 69.7 68 52.9
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.0e-10 68.6 61 57.4
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-08 61.6 48 62.5
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-08 61.6 48 62.5
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-08 61.6 48 62.5
Pp3c3_450 Physcomitrium patens HOM05D005828 ORTHO05D006822 7.6e-06 53.9 46 58.7


User provided reference genes

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