Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.7e-117 426.0 213 100.0
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 6.0e-107 391.0 214 92.5
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.1e-75 286.2 216 69.0
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 1.5e-70 270.0 217 65.9
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.6e-67 260.0 222 60.4
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 2.0e-62 243.0 180 64.4
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.0e-61 240.7 180 66.1
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 2.5e-60 236.1 180 64.4
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 3.2e-60 235.7 180 63.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 3.2e-60 235.7 199 61.8
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 4.2e-60 235.3 177 62.7
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 7.2e-60 234.6 199 61.3
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 3.6e-59 232.3 183 62.8
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 3.9e-58 228.8 175 64.6
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 3.9e-58 228.8 200 59.0
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.9e-58 228.8 180 65.0
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 3.9e-58 228.8 211 56.4
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 5.1e-58 228.4 183 62.3
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 6.7e-58 228.0 178 61.8
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.1e-57 227.3 178 64.6
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 2.6e-57 226.1 201 57.2
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 2.6e-57 226.1 176 60.8
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 2.6e-57 226.1 211 56.4
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.6e-57 226.1 177 62.7
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 3.3e-57 225.7 175 62.3
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 3.3e-57 225.7 180 60.0
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 4.4e-57 225.3 191 60.2
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 5.7e-57 224.9 176 64.2
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 7.4e-57 224.6 182 58.8
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.3e-56 223.8 174 62.6
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.2e-56 223.0 198 56.6
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 2.2e-56 223.0 200 56.5
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 3.7e-56 222.2 201 55.7
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 4.8e-56 221.9 183 56.8
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 6.3e-56 221.5 200 58.0
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 6.3e-56 221.5 179 59.8
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 8.2e-56 221.1 164 67.1
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 1.4e-55 220.3 180 58.3
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.8e-55 219.9 203 55.7
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 2.4e-55 219.5 173 59.5
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 2.4e-55 219.5 209 56.9
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.4e-55 219.5 180 60.0
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.1e-55 219.2 174 61.5
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 3.1e-55 219.2 200 55.5
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 4.1e-55 218.8 183 57.9
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 4.1e-55 218.8 183 59.6
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 5.3e-55 218.4 200 55.5
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 7.0e-55 218.0 176 58.0
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 9.1e-55 217.6 202 56.9
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 1.2e-54 217.2 204 52.9
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.6e-54 216.9 189 61.4
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 2.0e-54 216.5 179 60.3
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 2.0e-54 216.5 213 54.9
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.0e-54 216.5 179 59.2
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.6e-54 216.1 200 55.5
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 2.6e-54 216.1 179 60.3
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 3.5e-54 215.7 164 61.6
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.5e-54 215.7 189 61.4
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 3.5e-54 215.7 209 56.5
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.0e-53 214.2 194 54.6
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.0e-53 214.2 194 54.6
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.0e-53 214.2 194 54.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.0e-53 214.2 185 58.9
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.3e-53 213.8 183 56.3
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 2.9e-53 212.6 164 61.6
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 2.9e-53 212.6 205 56.1
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.8e-53 212.2 172 59.9
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 3.8e-53 212.2 200 54.0
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 3.8e-53 212.2 183 56.8
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 6.5e-53 211.5 176 56.8
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 8.5e-53 211.1 200 53.5
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 8.5e-53 211.1 200 54.5
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.9e-52 209.9 176 58.0
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 2.5e-52 209.5 194 54.1
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 3.2e-52 209.1 176 56.8
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 5.5e-52 208.4 172 59.9
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.2e-51 207.2 185 56.8
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.2e-51 207.2 194 53.6
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.2e-51 207.2 199 52.3
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 1.2e-51 207.2 178 58.4
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 1.6e-51 206.8 218 52.3
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 2.7e-51 206.1 223 51.6
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 2.7e-51 206.1 199 56.8
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 3.6e-51 205.7 177 59.9
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 3.6e-51 205.7 176 58.0
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.1e-49 200.7 188 54.8
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 9.7e-49 197.6 207 50.7
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 9.7e-49 197.6 177 57.1
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 1.7e-48 196.8 207 50.7
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.7e-48 196.8 181 51.9
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 2.2e-48 196.4 156 62.8
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 2.8e-48 196.1 162 57.4
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 4.8e-48 195.3 201 49.3
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 4.8e-48 195.3 167 58.7
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 4.8e-48 195.3 213 47.4
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.4e-47 193.0 195 52.8
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 7.0e-47 191.4 225 47.1
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 5.0e-45 185.3 199 46.2
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 1.5e-44 183.7 177 54.2
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 3.2e-44 182.6 186 50.5
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 4.7e-43 178.7 171 52.6
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.1e-43 178.3 188 50.5
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 4.8e-40 168.7 197 47.7
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 4.4e-33 145.6 202 42.1
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 3.1e-31 139.4 169 43.8
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 9.2e-31 137.9 168 42.3
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 2.3e-29 133.3 121 58.7
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.1e-28 131.0 196 38.8
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 4.3e-28 129.0 211 39.3
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 4.7e-27 125.6 149 46.3
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 3.0e-21 106.3 196 33.7
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 3.0e-21 106.3 71 67.6
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 5.0e-21 105.5 182 35.2
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.9e-20 103.6 182 31.9
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 7.3e-20 101.7 199 30.7
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 6.2e-19 98.6 96 54.2
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 5.4e-15 85.5 104 49.0
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 3.5e-14 82.8 139 33.8
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 6.2e-11 72.0 105 41.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.4e-09 65.9 181 26.0
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 3.7e-08 62.8 105 34.3


User provided reference genes

Program Settings