Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 7.1e-156 553.9 281 100.0
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 8.8e-90 334.3 205 83.9
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 3.2e-84 315.8 197 84.3
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 1.4e-82 310.5 197 81.2
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.4e-79 299.7 197 77.2
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.1e-79 299.3 196 77.0
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 4.5e-78 295.4 197 77.2
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 5.9e-78 295.0 197 75.6
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.3e-77 293.9 182 85.2
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 1.7e-77 293.5 197 75.6
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.7e-77 293.5 197 76.6
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 3.8e-77 292.4 197 76.1
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 5.0e-77 292.0 198 77.3
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.5e-76 290.4 197 76.1
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.5e-76 290.4 197 76.1
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.2e-76 289.3 197 76.1
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 3.2e-76 289.3 197 74.1
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 3.2e-76 289.3 197 75.1
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 4.2e-76 288.9 197 73.1
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 4.2e-76 288.9 193 75.6
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 5.5e-76 288.5 197 73.6
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 5.5e-76 288.5 197 73.1
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 5.5e-76 288.5 197 74.1
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 5.5e-76 288.5 197 74.6
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 5.5e-76 288.5 197 75.1
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 5.5e-76 288.5 198 74.7
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 9.4e-76 287.7 197 74.1
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 1.2e-75 287.3 197 74.1
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 1.2e-75 287.3 197 73.1
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 1.6e-75 287.0 197 72.6
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 1.6e-75 287.0 197 75.1
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 2.1e-75 286.6 197 74.6
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 4.7e-75 285.4 197 73.6
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 6.1e-75 285.0 197 73.1
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 6.1e-75 285.0 197 73.6
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 8.0e-75 284.6 197 74.1
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 8.0e-75 284.6 192 73.4
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 8.0e-75 284.6 194 75.3
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.0e-74 284.3 197 73.6
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 1.0e-74 284.3 197 73.6
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 1.0e-74 284.3 197 73.1
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 1.8e-74 283.5 197 74.1
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 1.8e-74 283.5 197 72.1
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 1.8e-74 283.5 197 71.6
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 1.8e-74 283.5 197 73.1
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 4.0e-74 282.3 197 73.6
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 5.2e-74 282.0 197 73.1
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 5.2e-74 282.0 197 73.1
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 5.2e-74 282.0 197 72.1
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 5.2e-74 282.0 197 72.1
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 6.8e-74 281.6 173 80.9
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 6.8e-74 281.6 197 73.1
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 6.8e-74 281.6 197 74.6
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 8.8e-74 281.2 197 74.1
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 8.8e-74 281.2 197 73.6
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 8.8e-74 281.2 197 72.6
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 1.2e-73 280.8 198 73.2
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 1.2e-73 280.8 201 71.6
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.5e-73 280.4 197 72.1
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 1.5e-73 280.4 197 73.1
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 1.5e-73 280.4 197 73.1
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 2.0e-73 280.0 197 72.6
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 2.0e-73 280.0 197 72.6
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.0e-73 280.0 176 78.4
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 2.0e-73 280.0 186 74.7
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 2.6e-73 279.6 198 72.2
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 3.4e-73 279.3 197 73.1
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 4.4e-73 278.9 176 77.8
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 4.4e-73 278.9 182 77.5
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 4.4e-73 278.9 197 72.1
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 5.7e-73 278.5 173 80.9
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 7.5e-73 278.1 182 77.5
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 9.8e-73 277.7 177 78.5
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 1.3e-72 277.3 175 78.3
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 1.7e-72 276.9 187 73.8
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 2.2e-72 276.6 197 73.1
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 2.8e-72 276.2 197 70.6
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 2.8e-72 276.2 197 69.0
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 3.7e-72 275.8 197 71.6
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 3.7e-72 275.8 197 73.1
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 4.8e-72 275.4 201 70.6
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 4.8e-72 275.4 184 76.1
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 4.8e-72 275.4 184 76.1
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 8.3e-72 274.6 185 75.7
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 1.1e-71 274.2 197 72.1
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 1.1e-71 274.2 197 72.1
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 1.1e-71 274.2 197 72.6
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 1.8e-71 273.5 186 73.7
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 1.8e-71 273.5 186 73.7
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 2.4e-71 273.1 197 71.1
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 2.4e-71 273.1 175 76.0
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 2.4e-71 273.1 173 78.6
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 2.4e-71 273.1 182 74.2
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 5.4e-71 271.9 197 72.1
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 7.0e-71 271.6 187 72.7
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 9.1e-71 271.2 197 70.6
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 9.1e-71 271.2 197 71.1
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 2.0e-70 270.0 197 67.5
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 2.7e-70 269.6 197 70.6
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 3.5e-70 269.2 175 75.4
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 3.5e-70 269.2 182 73.6
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 3.5e-70 269.2 197 70.1
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.0e-69 267.7 197 70.6
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 1.7e-69 266.9 193 71.0
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 2.9e-69 266.2 197 69.5
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 2.9e-69 266.2 197 70.1
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 1.1e-68 264.2 203 69.5
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 1.9e-68 263.5 197 70.6
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 3.2e-68 262.7 172 74.4
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 1.6e-67 260.4 175 73.1
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 4.7e-67 258.8 173 75.1
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 4.7e-67 258.8 175 72.6
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 2.3e-66 256.5 180 73.9
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 6.8e-66 255.0 197 66.0
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 6.8e-66 255.0 248 57.7
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 4.9e-64 248.8 177 70.1
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 6.3e-64 248.4 187 69.0
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 9.2e-63 244.6 176 71.6
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 9.2e-63 244.6 171 69.6
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 2.0e-62 243.4 199 62.3
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 2.7e-62 243.0 187 66.3
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 4.5e-62 242.3 204 62.3
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 4.5e-62 242.3 174 66.1
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 5.9e-62 241.9 197 62.9
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 1.3e-61 240.7 174 67.2
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 2.9e-61 239.6 174 67.2
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 5.0e-61 238.8 211 58.8
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 8.6e-61 238.0 188 64.9
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 1.9e-60 236.9 151 78.1
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 4.7e-59 232.3 176 65.9
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 6.1e-59 231.9 188 62.8
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 2.7e-54 216.5 172 64.5
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 3.3e-52 209.5 177 60.5
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 2.1e-51 206.8 177 58.8
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 1.5e-49 200.7 189 55.0
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 6.4e-48 195.3 176 57.4
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 1.4e-47 194.1 181 57.5
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 3.0e-45 186.4 172 55.2
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 8.3e-40 168.3 119 73.1
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 1.5e-36 157.5 99 78.8
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 4.2e-23 112.8 76 71.1
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 7.3e-20 102.1 50 94.0
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 2.1e-19 100.5 183 35.0
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 1.1e-18 98.2 68 72.1
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 1.1e-18 98.2 68 72.1
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.1e-18 96.7 68 70.6
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.7e-16 90.9 73 61.6
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 5.4e-15 85.9 85 54.1
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 1.3e-13 81.3 115 38.3
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 8.7e-13 78.6 68 57.4
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 4.8e-11 72.8 74 50.0
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 1.8e-10 70.9 37 89.2
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 2.4e-10 70.5 62 54.8
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 4.0e-10 69.7 70 57.1
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 9.0e-10 68.6 114 36.8
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 4.5e-09 66.2 35 82.9
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 4.5e-09 66.2 35 82.9
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.2e-08 63.9 35 80.0
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 5.5e-07 59.3 229 28.4


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