Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.5e-273 945.7 493 100.0
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 9.5e-257 889.8 506 91.7
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 7.4e-217 757.3 508 79.5
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 7.4e-217 757.3 494 77.9
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 7.7e-198 694.1 492 72.0
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 1.6e-195 686.4 495 71.3
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 2.7e-195 685.6 490 70.0
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 3.6e-195 685.3 492 70.1
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.9e-194 681.8 491 71.1
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 3.3e-193 678.7 492 69.7
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 2.4e-191 672.5 493 70.8
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 4.1e-191 671.8 486 70.4
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 5.3e-191 671.4 517 67.1
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 2.6e-190 669.1 494 68.6
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 3.4e-190 668.7 494 68.4
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 7.7e-190 667.5 494 68.2
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 1.7e-189 666.4 484 69.8
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 3.8e-189 665.2 489 68.7
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 8.5e-189 664.1 492 68.7
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 8.5e-189 664.1 494 68.0
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 6.1e-187 657.9 482 68.9
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 2.3e-186 656.0 486 68.9
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 6.7e-186 654.4 499 67.1
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 8.8e-186 654.1 498 67.1
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 1.5e-185 653.3 493 66.9
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.0e-185 652.9 496 67.5
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 5.7e-185 651.4 492 67.7
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 9.7e-185 650.6 493 67.7
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.7e-184 649.8 493 68.6
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 2.2e-184 649.4 491 67.6
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.2e-184 649.4 490 69.2
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 6.3e-184 647.9 524 63.5
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 1.6e-182 643.3 494 66.2
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 2.6e-182 642.5 491 66.8
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 4.5e-182 641.7 491 66.8
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 1.1e-180 637.1 493 65.9
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.9e-180 636.3 492 67.7
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 5.5e-180 634.8 493 66.1
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 2.7e-179 632.5 492 64.2
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 2.3e-178 629.4 492 65.9
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 6.7e-178 627.9 492 64.8
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 3.3e-177 625.5 478 66.9
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 7.5e-177 624.4 510 63.3
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.1e-175 620.5 494 66.2
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.8e-175 619.8 493 64.5
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 1.2e-174 617.1 538 60.8
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 4.5e-174 615.1 494 65.4
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 2.9e-173 612.5 482 64.7
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 2.9e-173 612.5 482 63.7
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 5.0e-173 611.7 482 64.7
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.1e-172 610.5 482 64.9
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 1.1e-172 610.5 471 65.8
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 2.5e-172 609.4 483 64.2
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 4.2e-172 608.6 482 64.7
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 5.5e-172 608.2 482 64.3
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 7.2e-172 607.8 463 65.7
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 9.4e-172 607.4 482 64.3
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.4e-170 603.6 482 64.1
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 5.2e-170 601.7 446 69.5
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 8.8e-170 600.9 498 62.2
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 1.2e-169 600.5 502 62.5
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 2.0e-169 599.7 446 67.9
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 2.6e-169 599.4 482 63.1
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 2.6e-169 599.4 500 63.2
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 3.7e-168 595.5 422 69.9
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.2e-166 590.5 493 64.1
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 3.5e-166 589.0 483 63.1
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 1.7e-165 586.6 456 64.7
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 6.6e-165 584.7 485 63.9
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 8.6e-165 584.3 453 65.8
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 1.9e-164 583.2 494 63.6
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 3.3e-164 582.4 509 61.1
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 4.9e-160 568.5 489 60.7
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 3.8e-157 558.9 452 63.3
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 6.6e-157 558.1 494 58.9
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.0e-154 550.8 532 57.5
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 1.4e-154 550.4 476 61.1
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 8.6e-149 531.2 559 54.4
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 6.8e-146 521.5 482 57.3
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 3.2e-143 512.7 494 53.8
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 9.2e-143 511.1 448 61.8
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.2e-142 510.8 489 57.5
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 3.0e-141 506.1 484 56.0
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 3.9e-141 505.8 394 64.0
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 5.1e-141 505.4 377 66.6
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 5.2e-138 495.4 515 54.8
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 1.3e-136 490.7 498 55.4
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 2.3e-133 479.9 484 52.1
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 6.8e-130 468.4 533 52.3
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 4.2e-127 459.1 489 49.5
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 2.8e-123 446.4 325 70.2
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 2.8e-123 446.4 483 49.7
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 3.2e-119 433.0 325 66.5
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 5.4e-119 432.2 485 48.2
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 5.1e-101 372.5 334 56.6
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 7.9e-94 348.6 490 43.1
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.3e-80 304.7 230 70.0
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 3.5e-57 226.9 511 34.2
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.2e-52 211.8 169 62.1
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 5.9e-49 199.5 196 50.5
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.8e-48 196.8 187 55.1
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 1.5e-47 194.9 186 53.8
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 4.2e-47 193.4 151 68.2
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 8.9e-45 185.7 173 53.2
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 4.3e-39 166.8 164 54.3
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 3.1e-37 160.6 180 50.6
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.5e-31 141.7 140 57.1
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 1.9e-31 141.4 172 48.3
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 4.0e-29 133.7 119 59.7
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 2.1e-22 111.3 71 84.5
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 2.3e-16 91.3 64 78.1
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 7.3e-07 59.7 117 29.9
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 1.3e-06 58.9 117 29.9


User provided reference genes

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