Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 4.6e-192 674.5 363 100.0
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 2.8e-157 558.9 363 87.6
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 2.5e-129 466.1 385 70.9
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 9.2e-108 394.4 401 59.4
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 1.4e-79 300.8 443 45.6
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 3.7e-56 223.0 368 41.3
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 1.3e-53 214.5 375 39.2
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 3.2e-52 209.9 372 39.2
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 4.7e-51 206.1 229 53.3
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 8.0e-51 205.3 259 45.9
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 8.8e-50 201.8 231 46.3
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.1e-49 201.4 259 43.2
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 1.5e-49 201.1 230 48.7
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 9.7e-49 198.4 231 49.4
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.7e-48 197.6 386 38.1
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 8.2e-48 195.3 340 40.0
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 8.2e-48 195.3 380 38.9
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 1.4e-47 194.5 372 39.8
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 2.4e-47 193.7 329 38.9
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 4.1e-47 193.0 382 35.6
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 4.1e-47 193.0 381 39.1
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 7.0e-47 192.2 342 40.9
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 1.2e-46 191.4 375 36.3
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 3.5e-46 189.9 368 37.8
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 1.0e-45 188.3 245 46.1
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 1.7e-45 187.6 323 42.1
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 2.9e-45 186.8 252 46.4
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 3.8e-45 186.4 278 39.9
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 5.0e-45 186.0 224 49.1
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 3.2e-44 183.3 389 38.8
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 3.2e-44 183.3 276 42.4
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 1.2e-43 181.4 223 46.6
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.0e-42 176.8 272 40.4
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 9.7e-41 171.8 231 44.2
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 8.3e-40 168.7 401 34.9
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 8.3e-40 168.7 364 38.2
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.1e-39 166.4 375 37.9
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 1.6e-38 164.5 375 37.9
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.6e-38 164.5 377 38.2
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 5.9e-38 162.5 375 37.6
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 1.3e-37 161.4 362 37.3
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 2.2e-37 160.6 247 37.7
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.2e-37 160.6 217 40.1
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.9e-37 160.2 373 37.8
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 6.5e-37 159.1 379 35.9
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.1e-36 158.3 249 41.4
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.5e-36 157.9 232 41.4
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 1.5e-36 157.9 370 36.5
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 1.9e-36 157.5 382 36.6
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 3.2e-36 156.8 371 36.9
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.2e-36 156.8 217 39.6
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 4.2e-36 156.4 322 39.1
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.2e-35 154.8 362 37.0
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 2.1e-35 154.1 253 40.7
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 2.7e-35 153.7 381 33.9
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 6.1e-35 152.5 351 33.9
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 8.0e-35 152.1 382 32.7
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 3.0e-34 150.2 364 34.9
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 6.8e-34 149.1 346 34.1
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 8.8e-34 148.7 411 35.0
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 8.8e-34 148.7 289 40.8
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 2.0e-33 147.5 275 34.9
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 4.4e-33 146.4 310 35.2
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 7.5e-33 145.6 326 33.4
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 1.1e-31 141.7 366 35.0
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 2.7e-30 137.1 206 40.8
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 4.5e-30 136.3 202 40.1
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 1.3e-29 134.8 374 31.6
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 2.3e-29 134.0 295 36.6
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 8.6e-29 132.1 227 38.3
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 1.9e-28 131.0 351 32.8
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 3.3e-28 130.2 251 41.0
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 2.1e-27 127.5 359 32.6
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 2.8e-27 127.1 368 34.5
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 1.0e-26 125.2 334 32.6
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 1.5e-25 121.3 358 34.1
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 2.0e-25 120.9 313 37.4
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 2.6e-25 120.6 314 38.2
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 5.7e-25 119.4 315 36.8
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 7.5e-25 119.0 315 36.8
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 7.5e-25 119.0 315 36.8
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 9.8e-25 118.6 184 41.3
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 6.3e-24 115.9 361 33.2
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.7e-22 110.5 222 40.1
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 2.7e-22 110.5 156 42.3
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 3.6e-19 100.1 355 29.6
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 5.2e-18 96.3 159 37.7
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 6.8e-18 95.9 355 31.5
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.0e-14 82.8 217 35.9
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 5.0e-13 79.7 225 29.8
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 5.0e-13 79.7 195 35.4
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 8.9e-10 68.9 263 30.0
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.5e-09 68.2 252 28.2
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 6.4e-08 62.8 70 54.3
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 1.4e-07 61.6 221 32.6
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 3.5e-06 57.0 222 31.5


User provided reference genes

Program Settings