Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 2942.1 1479 100.0
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 2715.3 1481 92.7
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 2150.2 1491 75.2
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 2064.7 1493 72.4
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1837.0 1490 64.6
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1654.4 1511 58.2
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1608.6 1558 55.7
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1574.7 1527 55.9
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1545.4 1531 55.2
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1538.1 1536 55.3
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1535.0 1525 55.2
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1529.2 1525 54.7
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1521.1 1522 54.9
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1513.0 1527 54.6
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1512.7 1567 53.9
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1498.4 1518 54.2
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1496.5 1535 53.6
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1494.6 1525 53.6
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1491.5 1523 53.7
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1491.5 1519 53.7
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1490.7 1521 53.8
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1478.0 1519 53.5
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1469.1 1523 53.4
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1464.5 1545 52.8
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1460.7 1527 52.9
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1456.8 1515 53.1
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1456.0 1539 52.3
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1453.0 1478 53.9
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1452.6 1483 54.1
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1444.9 1532 51.6
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1438.3 1627 50.0
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1437.6 1570 51.8
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1406.0 1528 52.2
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1404.4 1525 52.2
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1403.7 1525 51.8
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1403.3 1619 49.6
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1402.9 1516 51.9
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1402.9 1533 52.1
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1401.0 1530 51.4
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1397.1 1539 50.9
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1396.7 1530 50.3
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1396.7 1518 51.6
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1395.2 1533 50.2
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1394.4 1519 50.6
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1390.6 1538 51.1
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1389.0 1517 51.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1388.6 1536 50.8
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1388.2 1546 51.2
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1385.5 1516 51.0
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1384.4 1513 51.0
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1382.1 1521 51.1
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1379.4 1545 50.4
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1377.1 1519 50.2
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1375.9 1522 51.2
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1370.1 1517 51.2
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1368.6 1501 50.0
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1367.4 1535 50.6
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1367.4 1508 49.9
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1366.7 1504 49.9
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1365.1 1505 50.0
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1365.1 1505 50.0
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1362.4 1504 51.3
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1360.9 1500 50.5
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1357.0 1502 49.7
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1355.5 1536 49.8
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1355.1 1523 49.3
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1354.3 1536 49.3
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1354.0 1524 49.5
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1352.4 1523 49.9
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1350.5 1516 50.5
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1345.9 1542 49.5
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1344.3 1572 48.4
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1342.4 1536 49.5
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1340.9 1429 52.3
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1337.4 1570 48.0
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1332.8 1539 49.3
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1320.1 1494 50.7
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1316.2 1521 49.4
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1315.8 1519 49.2
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1303.1 1353 54.0
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1302.7 1573 47.4
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1287.7 1514 48.3
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1281.9 1553 48.6
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1273.8 1538 48.2
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1226.8 1589 45.1
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1204.9 1413 47.6
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1177.5 1344 50.5
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1149.4 1367 48.3
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1138.3 1311 50.0
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1117.1 1557 42.8
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1110.9 1536 44.3
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1109.0 1445 45.5
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 3.9e-306 1055.4 1137 52.8
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 6.5e-301 1038.1 1547 40.9
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 4.4e-281 972.2 1105 51.4
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 2.6e-249 866.7 1638 36.0
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 6.6e-229 798.9 988 46.0
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 3.8e-184 650.2 903 42.6
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.4e-178 631.7 485 68.0
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 5.3e-178 629.8 488 67.4
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 4.0e-165 587.0 1487 30.4
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.6e-137 493.8 1047 34.4
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 8.1e-118 429.9 693 39.1
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 3.2e-82 311.6 388 48.2
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.7e-65 254.6 623 30.5
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.5e-50 206.5 204 53.4
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 8.8e-48 197.2 166 65.1
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 2.9e-35 155.6 107 69.2
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 6.6e-27 127.9 91 63.7
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 5.8e-23 114.8 86 62.8
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 5.8e-23 114.8 86 62.8
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 3.7e-22 112.1 81 70.4
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 3.0e-19 102.4 91 50.5
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.5e-18 100.1 86 53.5
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 4.3e-18 98.6 80 51.2
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.8e-16 93.2 67 71.6


User provided reference genes

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