Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 7.5e-281 969.9 510 100.0
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 6.8e-258 893.6 511 93.7
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 1.2e-257 892.9 510 90.8
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.1e-255 886.3 510 90.6
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 86.1
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 7.3e-244 847.0 511 85.5
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 85.3
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 3.6e-243 844.7 511 85.5
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 4.7e-243 844.3 512 85.0
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.8e-242 842.4 511 84.9
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 2.4e-242 842.0 511 84.9
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 8.9e-242 840.1 511 85.1
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 1.2e-241 839.7 511 84.5
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 5.8e-241 837.4 510 83.9
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 7.6e-241 837.0 511 83.8
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 7.6e-241 837.0 510 83.7
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 9.9e-241 836.6 511 83.8
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 9.9e-241 836.6 511 84.0
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 1.7e-240 835.9 511 84.3
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 2.2e-240 835.5 510 83.9
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 2.9e-240 835.1 511 83.6
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.8e-240 834.7 511 84.9
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 4.9e-240 834.3 511 84.0
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 6.4e-240 833.9 511 83.4
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 6.4e-240 833.9 510 83.9
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 6.4e-240 833.9 511 83.6
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 6.4e-240 833.9 511 84.9
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 6.4e-240 833.9 511 84.9
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 8.4e-240 833.6 513 84.0
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 83.2
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 83.6
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.1e-239 833.2 511 83.2
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 1.4e-239 832.8 511 83.6
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.4e-239 832.8 512 83.8
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.4e-239 832.8 511 84.0
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.9e-239 832.4 511 82.6
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 3.2e-239 831.6 512 83.8
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 3.2e-239 831.6 511 83.2
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 4.2e-239 831.2 511 83.6
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.2e-239 831.2 510 83.7
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 4.2e-239 831.2 511 84.3
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 5.4e-239 830.9 510 83.9
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 7.1e-239 830.5 511 83.4
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 7.1e-239 830.5 510 83.1
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 9.3e-239 830.1 511 83.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 9.3e-239 830.1 511 83.4
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 9.3e-239 830.1 510 84.1
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 9.3e-239 830.1 511 83.8
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 1.2e-238 829.7 511 82.6
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.6e-238 829.3 512 83.4
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 2.7e-238 828.6 511 82.6
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.7e-238 828.6 511 82.8
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 3.5e-238 828.2 511 83.2
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 3.5e-238 828.2 510 84.1
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 3.5e-238 828.2 511 83.4
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.5e-238 828.2 511 83.6
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 4.6e-238 827.8 512 83.2
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 4.6e-238 827.8 511 83.8
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 6.0e-238 827.4 510 83.3
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 7.8e-238 827.0 511 83.2
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 1.0e-237 826.6 511 83.2
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 2.3e-237 825.5 511 83.2
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 2.3e-237 825.5 511 82.8
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 3.0e-237 825.1 511 83.4
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 3.0e-237 825.1 511 83.0
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 3.9e-237 824.7 511 82.6
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 3.9e-237 824.7 512 82.8
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 3.9e-237 824.7 511 83.2
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 8.7e-237 823.5 512 83.2
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 1.5e-236 822.8 550 78.9
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 1.9e-236 822.4 511 82.6
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 3.3e-236 821.6 511 82.2
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 4.3e-236 821.2 510 82.0
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 1.3e-235 819.7 511 83.8
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 2.8e-235 818.5 511 82.2
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 3.6e-235 818.1 512 81.4
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 3.6e-235 818.1 511 82.0
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 6.2e-235 817.4 511 82.0
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 6.2e-235 817.4 511 82.0
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 8.1e-235 817.0 511 82.2
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.8e-234 815.8 510 81.4
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 3.1e-234 815.1 511 82.2
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 6.9e-234 813.9 510 81.8
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 9.0e-234 813.5 510 82.0
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.2e-233 813.1 511 81.2
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.5e-233 812.8 511 81.6
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 1.5e-233 812.8 511 81.6
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 2.6e-233 812.0 512 80.9
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 3.4e-233 811.6 510 81.8
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 4.5e-233 811.2 511 80.8
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 5.8e-233 810.8 510 81.4
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 7.6e-233 810.4 524 80.7
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.3e-232 809.7 510 81.2
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.7e-232 809.3 510 81.4
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.2e-232 808.9 511 81.4
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.2e-232 808.9 495 85.1
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 2.9e-232 808.5 510 81.0
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.9e-232 808.5 510 81.0
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.9e-232 808.5 510 81.0
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 4.9e-232 807.7 511 81.2
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 7.1e-231 803.9 506 82.8
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 3.0e-229 798.5 511 80.4
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 8.7e-229 797.0 525 79.0
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 1.9e-228 795.8 512 80.1
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 4.3e-228 794.7 494 83.4
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 9.6e-228 793.5 511 79.3
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 2.1e-227 792.3 495 82.2
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 3.6e-227 791.6 495 82.8
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 6.2e-227 790.8 512 79.9
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 8.1e-227 790.4 511 79.8
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 8.1e-227 790.4 511 79.8
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 1.1e-226 790.0 511 79.6
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 2.4e-226 788.9 511 79.6
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.6e-225 785.4 511 79.5
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.2e-224 782.3 494 81.2
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 6.4e-224 780.8 510 77.6
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 1.1e-223 780.0 489 81.6
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 2.1e-222 775.8 511 78.5
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 8.7e-221 770.4 494 80.6
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 5.6e-220 767.7 510 76.9
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 9.6e-220 766.9 548 75.0
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 3.7e-219 765.0 473 83.5
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 3.7e-219 765.0 557 73.4
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 7.4e-212 740.7 512 75.4
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.7e-211 738.4 525 74.9
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.7e-211 738.4 525 74.9
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 6.3e-211 737.6 510 75.9
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 4.5e-209 731.5 510 74.3
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 4.6e-206 721.5 442 83.9
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 1.3e-195 686.8 473 77.6
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 5.5e-191 671.4 512 71.3
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 1.4e-189 666.8 514 65.2
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 5.7e-188 661.4 504 70.8
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 7.4e-188 661.0 414 81.6
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-187 659.4 503 67.6
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 7.2e-183 644.4 510 68.2
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 5.3e-178 628.2 365 88.8
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.3e-176 623.6 514 60.9
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 1.5e-175 620.2 469 70.8
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 3.1e-170 602.4 376 80.9
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 2.3e-168 596.3 347 89.3
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 3.2e-167 592.4 511 60.7
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 3.2e-167 592.4 379 80.7
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 1.8e-165 586.6 516 58.3
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.6e-161 573.5 494 57.9
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 2.3e-160 569.7 504 63.7
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 2.5e-159 566.2 365 81.6
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.6e-150 537.0 325 85.8
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 6.2e-150 535.0 499 54.3
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-142 510.4 457 64.3
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 3.2e-138 496.1 307 84.0
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 4.3e-135 485.7 383 64.8
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 7.3e-135 485.0 284 88.4
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.1e-114 417.9 515 46.0
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.6e-113 412.5 255 83.1
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.3e-107 394.4 245 83.7
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 2.7e-105 386.7 267 76.0
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 2.5e-103 380.2 484 44.0
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.4e-101 374.4 386 52.3
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 1.2e-92 344.7 511 37.8
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.8e-80 304.3 200 82.0
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-67 260.8 343 43.4
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 4.8e-62 243.0 503 37.4
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 1.6e-57 228.0 365 41.4
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.8e-56 224.6 144 79.9
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.0e-53 212.6 310 41.3
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 1.4e-45 188.3 117 78.6
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 9.2e-45 185.7 143 72.0
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.9e-43 180.6 206 49.5
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.2e-40 169.9 197 48.2
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 1.5e-34 151.8 106 75.5
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.5e-28 130.6 119 52.1
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 1.3e-27 128.6 82 82.9
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 2.1e-20 104.8 121 55.4
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 5.6e-10 70.1 61 57.4
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 3.1e-08 64.3 37 83.8
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 9.0e-08 62.8 96 47.9
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 6.4e-06 56.6 38 71.1


User provided reference genes

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