Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 5.2e-125 451.1 227 100.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.8e-94 348.2 183 96.2
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.9e-90 336.3 183 92.3
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 3.6e-86 322.0 192 87.0
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 6.2e-86 321.2 183 86.9
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 6.2e-86 321.2 183 86.9
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.9e-83 311.6 183 84.2
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.1e-82 310.5 183 84.2
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.4e-82 309.3 183 82.5
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 7.1e-82 307.8 183 83.1
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 7.1e-82 307.8 183 83.1
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 9.3e-82 307.4 183 83.1
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.6e-81 306.6 183 83.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 2.1e-81 306.2 183 81.4
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 4.6e-81 305.1 183 80.9
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.9e-81 304.3 183 80.9
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.3e-80 303.5 183 82.0
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.3e-80 303.5 183 80.3
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.3e-80 302.8 183 80.9
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.3e-80 302.8 183 81.4
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 3.0e-80 302.4 188 81.4
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 6.7e-80 301.2 183 80.3
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.5e-79 300.1 183 79.8
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-79 299.7 183 79.8
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-79 299.7 183 79.8
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.9e-79 299.7 183 78.7
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.5e-79 299.3 183 81.4
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 3.3e-79 298.9 183 79.8
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 3.3e-79 298.9 183 79.8
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 4.3e-79 298.5 183 80.3
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 7.4e-79 297.7 183 79.8
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.6e-79 297.4 183 79.2
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 9.6e-79 297.4 183 78.1
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.3e-78 297.0 183 80.3
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 1.6e-78 296.6 183 77.6
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 3.7e-78 295.4 187 79.1
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.8e-78 295.0 183 79.8
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 6.2e-78 294.7 183 77.6
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 8.1e-78 294.3 183 77.6
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.1e-77 293.9 183 79.2
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.1e-77 293.9 183 79.2
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.1e-77 293.9 183 79.2
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.4e-77 293.5 183 78.1
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 2.4e-77 292.7 183 78.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 3.1e-77 292.4 183 77.6
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 5.3e-77 291.6 183 77.6
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.3e-77 291.6 183 77.0
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.3e-77 291.6 183 77.0
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 6.9e-77 291.2 183 77.6
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.0e-77 290.8 183 78.1
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.0e-77 290.8 183 78.1
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.5e-76 290.0 211 70.1
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.5e-76 290.0 211 70.1
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.5e-76 290.0 183 77.0
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.6e-76 289.3 183 77.6
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 3.4e-76 288.9 183 79.8
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 7.6e-76 287.7 183 79.2
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 7.6e-76 287.7 183 76.0
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.0e-75 287.3 183 76.0
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.3e-75 287.0 183 77.0
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.3e-75 287.0 183 77.0
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.3e-75 287.0 183 77.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.3e-75 287.0 183 77.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.3e-75 287.0 183 77.0
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.3e-75 287.0 184 76.6
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.3e-75 287.0 184 77.7
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.3e-75 287.0 183 77.6
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.7e-75 286.6 183 77.6
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 2.9e-75 285.8 183 77.0
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 3.8e-75 285.4 183 76.5
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 3.8e-75 285.4 183 75.4
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 4.9e-75 285.0 183 76.5
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 8.4e-75 284.3 183 76.5
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.1e-74 283.9 183 74.3
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.4e-74 283.5 183 76.0
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.9e-74 283.1 183 74.9
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 2.5e-74 282.7 183 76.0
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.5e-74 281.6 183 76.0
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 7.1e-74 281.2 209 70.8
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 9.3e-74 280.8 183 77.0
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 2.1e-73 279.6 183 74.3
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 6.0e-73 278.1 183 76.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 2.5e-71 272.7 209 67.5
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 2.5e-71 272.7 183 76.0
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 3.7e-70 268.9 189 72.5
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 3.1e-69 265.8 183 70.5
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 5.3e-69 265.0 183 73.8
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.7e-67 260.0 183 73.8
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.8e-67 258.8 183 72.1
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.7e-65 252.7 155 81.3
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.5e-63 246.1 190 67.9
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 9.7e-63 244.2 183 65.0
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 9.7e-63 244.2 158 77.2
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.3e-62 243.8 183 63.9
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 3.7e-62 242.3 181 70.2
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.2e-60 237.3 158 75.9
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.6e-60 236.1 183 63.9
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 4.5e-60 235.3 183 64.5
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 5.5e-58 228.4 196 62.8
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.6e-57 226.9 139 83.5
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.7e-56 221.5 183 66.1
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 5.3e-53 211.8 198 59.6
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 3.4e-52 209.1 131 77.1
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 6.1e-49 198.4 124 83.1
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 3.3e-47 192.6 124 79.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 7.4e-47 191.4 170 61.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 3.7e-46 189.1 139 70.5
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-44 184.1 120 79.2
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.3e-38 164.1 98 83.7
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.5e-36 155.6 108 75.0
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.7e-28 129.8 123 58.5
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.5e-28 129.0 100 65.0
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.1e-25 120.2 183 37.2
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.7e-25 119.0 176 41.5
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.7e-25 119.0 76 67.1
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 3.0e-24 116.3 181 37.0
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.5e-23 114.0 101 64.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 2.6e-23 113.2 101 63.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 3.6e-17 92.8 113 49.6
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.5e-15 87.4 67 67.2
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.7e-14 84.0 69 53.6
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.2e-07 61.2 30 80.0


User provided reference genes

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