Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 5.6e-164 580.9 293 100.0
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 3.8e-104 382.1 272 76.5
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 5.9e-89 331.6 314 59.2
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.1e-77 292.7 289 57.8
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.7e-75 285.8 287 56.4
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 5.6e-63 245.4 227 55.9
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 2.1e-62 243.4 293 47.4
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 2.8e-62 243.0 284 49.3
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 8.1e-62 241.5 279 49.5
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 1.5e-60 237.3 223 56.1
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.3e-59 234.2 291 46.7
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 1.4e-58 230.7 224 52.7
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 4.2e-58 229.2 221 53.4
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 4.2e-58 229.2 288 48.3
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.2e-57 227.6 274 48.2
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 4.6e-57 225.7 221 52.0
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.3e-56 224.2 216 53.7
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.3e-56 224.2 221 52.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 5.1e-56 222.2 224 50.4
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 8.7e-56 221.5 295 44.7
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.5e-55 220.7 309 43.7
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 1.5e-55 220.7 277 46.6
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 2.5e-55 219.9 223 52.9
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 3.3e-55 219.5 234 52.6
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 7.3e-55 218.4 221 53.4
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.3e-54 217.6 225 52.9
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 6.2e-54 215.3 220 49.5
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.2e-54 215.3 295 44.1
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 8.1e-54 214.9 303 43.6
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.1e-53 214.5 242 48.3
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.1e-53 214.5 268 45.5
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.4e-53 214.2 221 52.0
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 6.9e-53 211.8 216 52.3
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.2e-52 211.1 270 44.8
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 2.6e-52 209.9 230 50.9
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 4.4e-52 209.1 309 41.1
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.4e-52 209.1 271 46.1
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 5.8e-52 208.8 271 46.1
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 5.8e-52 208.8 207 53.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.7e-51 207.2 224 49.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 2.9e-51 206.5 218 50.0
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.9e-51 206.5 211 51.7
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 8.4e-51 204.9 207 52.7
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.1e-50 204.5 202 54.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 2.4e-50 203.4 265 46.8
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 5.4e-50 202.2 257 45.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 5.4e-50 202.2 247 47.8
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 5.4e-50 202.2 203 54.7
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.1e-50 201.8 202 54.5
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 9.3e-50 201.4 224 48.2
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 9.3e-50 201.4 249 47.4
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.1e-49 200.3 200 53.0
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.7e-49 199.9 264 44.7
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 6.0e-49 198.7 214 50.0
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 6.0e-49 198.7 198 53.5
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.7e-48 197.2 190 57.4
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.7e-48 197.2 201 53.2
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.3e-48 196.8 200 53.0
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.3e-48 196.8 200 53.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 2.3e-48 196.8 211 52.1
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.0e-48 196.4 249 46.6
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 3.0e-48 196.4 222 50.0
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 6.6e-48 195.3 202 51.0
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.9e-47 193.7 201 52.2
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 4.3e-47 192.6 237 46.8
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 5.6e-47 192.2 295 45.4
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.6e-46 190.7 251 44.6
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 2.8e-46 189.9 297 41.1
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 3.6e-46 189.5 224 47.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 6.2e-46 188.7 205 48.8
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 8.1e-46 188.3 299 41.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.8e-45 187.2 203 49.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.3e-45 185.7 253 47.4
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 9.0e-45 184.9 210 49.5
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 9.0e-45 184.9 200 51.5
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.0e-44 183.7 209 47.8
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 3.4e-44 183.0 194 49.5
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 1.7e-43 180.6 199 51.3
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.7e-43 180.6 196 52.0
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.2e-43 180.3 198 48.0
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 4.9e-43 179.1 199 50.8
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 4.9e-43 179.1 199 50.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 4.9e-43 179.1 196 48.5
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.4e-42 177.6 197 50.8
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.9e-42 177.2 198 46.5
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 9.3e-42 174.9 197 50.3
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 9.3e-42 174.9 193 51.3
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 2.1e-41 173.7 199 51.3
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.7e-41 173.3 180 54.4
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 3.5e-41 172.9 200 49.0
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 7.9e-41 171.8 174 52.9
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.3e-40 170.2 194 45.9
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 8.7e-40 168.3 201 48.3
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.6e-38 164.1 198 46.5
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 2.8e-38 163.3 195 49.7
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 3.7e-38 162.9 198 49.0
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 8.1e-38 161.8 237 39.7
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.1e-37 161.4 256 43.8
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 1.8e-37 160.6 211 43.6
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 5.3e-37 159.1 210 43.8
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 9.0e-37 158.3 193 49.7
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.2e-36 157.9 270 37.8
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.0e-36 157.1 198 42.9
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 7.6e-36 155.2 221 42.1
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.5e-34 150.2 203 39.9
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 3.0e-32 143.3 186 47.3
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 3.9e-32 142.9 178 48.9
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 9.6e-31 138.3 210 35.7
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 7.6e-28 128.6 197 42.1
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.8e-27 126.3 176 43.2
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.1e-25 120.6 208 38.9
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 2.5e-18 97.1 93 53.8
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.9e-16 89.7 181 34.3
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 6.3e-14 82.4 62 67.7
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.0e-08 65.1 54 61.1


User provided reference genes

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