Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.4e-250 867.8 432 100.0
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 2.2e-217 758.8 437 86.3
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.7e-209 732.6 435 82.5
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 4.7e-199 698.0 434 83.6
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 6.1e-199 697.6 421 79.8
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 7.4e-197 690.6 422 79.9
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 4.8e-196 688.0 431 77.5
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 7.0e-195 684.1 419 78.3
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 7.0e-195 684.1 434 76.7
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 1.2e-194 683.3 419 79.0
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 2.6e-194 682.2 421 78.4
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 5.9e-194 681.0 429 76.9
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 3.8e-193 678.3 422 78.0
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 3.8e-193 678.3 419 77.3
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 3.8e-193 678.3 421 79.6
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.5e-193 677.6 429 76.2
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 8.5e-193 677.2 425 76.5
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.9e-192 676.0 424 77.8
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.9e-192 676.0 422 78.0
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 4.2e-192 674.9 434 76.3
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 7.2e-192 674.1 419 76.8
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 9.4e-192 673.7 422 77.7
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.2e-191 673.3 425 78.1
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 1.6e-191 672.9 425 76.9
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 8.0e-191 670.6 421 77.0
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 8.0e-191 670.6 421 77.4
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 8.0e-191 670.6 421 77.2
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 5.2e-190 667.9 427 74.9
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 7.4e-189 664.1 421 76.0
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.3e-188 663.3 421 75.8
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.3e-188 663.3 419 76.8
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 2.2e-188 662.5 442 74.2
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 3.7e-188 661.8 423 75.7
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 3.7e-188 661.8 443 73.8
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 8.2e-188 660.6 420 75.7
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.1e-187 660.2 456 73.0
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.8e-187 659.4 426 74.9
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 5.3e-187 657.9 421 75.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 5.3e-187 657.9 476 69.7
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 9.1e-187 657.1 423 75.7
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 9.1e-187 657.1 422 75.4
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.2e-186 656.8 439 74.0
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 2.0e-186 656.0 421 75.1
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.7e-186 654.1 422 75.1
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.0e-185 653.7 420 75.5
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.3e-185 653.3 421 73.9
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.7e-185 652.9 423 73.8
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 3.8e-185 651.7 421 73.6
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 3.8e-185 651.7 420 76.0
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 5.0e-185 651.4 432 71.8
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.1e-184 650.2 426 72.3
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 2.5e-184 649.0 432 71.5
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 3.2e-184 648.7 426 72.8
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 3.2e-184 648.7 420 75.5
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 7.2e-184 647.5 420 76.0
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.2e-183 646.7 421 73.2
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 1.6e-183 646.4 432 71.1
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.6e-183 646.4 420 74.5
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 2.1e-183 646.0 420 74.5
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 3.3e-181 638.6 447 70.7
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 3.3e-181 638.6 420 73.6
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 4.8e-180 634.8 424 73.3
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 3.1e-179 632.1 422 73.2
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.8e-177 625.2 378 78.8
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 8.5e-177 624.0 421 74.1
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 3.6e-175 618.6 488 66.0
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 3.0e-174 615.5 454 68.5
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 4.4e-173 611.7 380 77.6
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 3.7e-172 608.6 420 71.4
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 6.3e-172 607.8 435 70.1
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 1.1e-171 607.1 381 76.6
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 5.4e-171 604.7 421 73.4
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.7e-170 602.4 381 75.3
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 5.9e-170 601.3 381 75.3
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 2.9e-169 599.0 384 74.5
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 7.2e-168 594.3 380 73.9
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 2.3e-166 589.3 420 70.2
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 2.8e-164 582.4 390 72.6
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.0e-162 576.2 420 67.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 6.6e-161 571.2 372 73.4
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 6.4e-156 554.7 421 64.8
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 5.4e-155 551.6 411 67.2
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 1.2e-154 550.4 418 67.0
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 1.3e-153 547.0 337 77.7
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 1.9e-152 543.1 420 63.6
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 3.6e-151 538.9 423 62.2
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 9.8e-149 530.8 352 72.2
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.3e-148 530.4 313 82.7
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 1.2e-146 523.9 422 64.7
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.7e-137 493.4 337 68.5
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 9.9e-125 451.1 421 55.8
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 4.8e-119 432.2 421 53.9
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 4.5e-117 425.6 461 49.2
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.6e-106 390.6 246 75.6
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 6.7e-105 385.2 242 73.6
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 3.2e-99 366.3 438 47.3
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 2.4e-86 323.6 276 57.2
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 7.7e-85 318.5 291 59.5
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 2.9e-84 316.6 291 59.5
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 3.2e-83 313.2 202 71.3
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.2e-77 294.7 230 66.1
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 4.2e-67 259.6 211 64.0
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.5e-61 240.0 179 63.7
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 1.0e-60 238.4 302 49.3
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 4.2e-59 233.0 450 38.4
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 2.0e-56 224.2 164 65.9
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 6.6e-36 156.0 93 78.5
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 6.6e-36 156.0 119 60.5
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 5.1e-28 129.8 85 77.6
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 2.5e-27 127.5 89 70.8
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 7.8e-13 79.3 58 62.1
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 8.4e-07 59.3 42 69.0
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.2e-06 57.4 41 63.4


User provided reference genes

Program Settings