Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.2e-129 465.7 246 100.0
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.3e-121 439.9 247 94.3
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 5.2e-54 215.3 254 49.6
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 5.1e-33 145.6 242 41.3
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 4.3e-32 142.5 245 40.4
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 5.2e-30 135.6 248 41.1
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 6.9e-30 135.2 250 37.6
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.8e-28 129.4 254 39.4
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 8.4e-28 128.3 249 39.4
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.4e-27 127.5 262 37.8
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 2.4e-27 126.7 243 39.5
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.2e-27 126.3 249 40.2
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 3.0e-25 119.8 233 38.2
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 3.9e-25 119.4 222 41.0
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 8.7e-25 118.2 247 36.8
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 1.5e-24 117.5 245 36.7
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 4.3e-24 115.9 239 38.9
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 9.6e-24 114.8 241 36.1
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 2.1e-23 113.6 247 36.0
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 6.2e-23 112.1 245 34.7
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.1e-22 111.3 247 35.6
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.4e-22 110.9 253 36.4
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 2.4e-22 110.2 243 37.0
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 3.1e-22 109.8 254 35.8
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 4.0e-22 109.4 255 33.3
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 6.9e-22 108.6 246 36.6
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 9.0e-22 108.2 250 34.4
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 2.0e-21 107.1 256 33.6
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 2.0e-21 107.1 245 35.1
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 2.6e-21 106.7 237 36.7
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 2.6e-21 106.7 245 35.1
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 3.4e-21 106.3 244 36.5
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 4.5e-21 105.9 246 37.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 1.3e-20 104.4 243 35.0
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 2.2e-20 103.6 256 35.2
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 2.2e-20 103.6 277 34.7
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 6.4e-20 102.1 222 36.0
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 1.1e-19 101.3 243 36.6
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 1.4e-19 100.9 326 30.1
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 1.4e-19 100.9 243 37.0
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.4e-19 100.9 242 36.4
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 3.2e-19 99.8 243 37.4
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 5.4e-19 99.0 327 30.0
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 1.2e-18 97.8 239 36.8
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.2e-18 97.8 223 34.5
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 6.0e-18 95.5 242 33.1
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.3e-17 94.4 258 32.2
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 1.8e-17 94.0 243 32.9
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 3.9e-17 92.8 247 33.6
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 6.7e-17 92.0 229 34.5
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 8.7e-17 91.7 262 30.5
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 8.7e-17 91.7 246 32.9
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.1e-16 91.3 241 35.3
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.9e-16 90.5 199 36.7
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 3.3e-16 89.7 225 32.4
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 4.3e-16 89.4 370 29.2
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 7.4e-16 88.6 233 33.5
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 3.6e-15 86.3 264 31.1
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 6.2e-15 85.5 259 31.3
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.4e-14 83.6 207 34.3
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 2.4e-14 83.6 255 33.7
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 4.0e-14 82.8 253 31.2
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 1.5e-13 80.9 232 30.2
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 2.0e-13 80.5 250 30.4
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 7.6e-13 78.6 238 30.7
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 2.9e-12 76.6 218 33.5
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 2.9e-12 76.6 266 28.2
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 8.4e-12 75.1 240 32.5
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 1.9e-11 73.9 231 31.6
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 2.4e-11 73.6 267 29.6
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 3.2e-11 73.2 249 29.7
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 2.1e-10 70.5 251 30.7
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 3.5e-10 69.7 245 29.4
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 4.6e-10 69.3 238 30.3
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 7.9e-10 68.6 228 32.0
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 7.9e-10 68.6 287 30.0
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 1.3e-09 67.8 282 29.1
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 1.3e-09 67.8 242 27.3
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 1.8e-09 67.4 283 30.4
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 3.0e-09 66.6 181 33.1
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 6.7e-09 65.5 76 52.6
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 8.7e-09 65.1 243 30.0
BcaC01g00269 Brassica carinata HOM05D011065 ORTHO05D009410 8.7e-09 65.1 247 31.6
C03p77450 Brassica napus HOM05D011065 ORTHO05D009410 8.7e-09 65.1 247 31.6
BolC3t20000H Brassica oleracea HOM05D011065 ORTHO05D009410 8.7e-09 65.1 247 31.6
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 1.5e-08 64.3 251 31.5
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 1.5e-08 64.3 265 26.8
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 1.5e-08 64.3 242 28.9
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 1.9e-08 63.9 275 26.9
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.9e-08 63.9 236 29.7
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 2.5e-08 63.5 273 30.8
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 2.5e-08 63.5 262 29.4
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 5.6e-08 62.4 258 29.5
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 1.3e-07 61.2 257 30.4
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 1.3e-07 61.2 257 30.4
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 1.3e-07 61.2 257 30.4
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 2.8e-07 60.1 241 29.5
CDE02G1861 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 2.4e-06 57.0 121 33.9


User provided reference genes

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