Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 0.0e+00 1162.9 630 100.0
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 0.0e+00 1088.9 630 93.2
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 5.1e-279 964.1 631 78.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 3.9e-255 884.8 631 72.4
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 2.1e-248 862.4 639 75.0
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.4e-223 780.0 625 68.0
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 4.7e-200 701.8 638 59.1
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.4e-199 700.3 642 57.0
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 2.3e-199 699.5 635 59.2
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 7.5e-198 694.5 494 68.0
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 4.9e-197 691.8 641 59.3
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 2.0e-195 686.4 659 57.4
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 3.5e-195 685.6 642 58.9
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 6.6e-194 681.4 648 56.6
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.5e-193 680.2 641 57.4
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.9e-193 679.9 633 58.3
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 9.5e-193 677.6 638 58.6
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 9.5e-193 677.6 634 58.0
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.8e-192 676.0 644 56.7
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 4.0e-191 672.2 647 56.1
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 6.8e-191 671.4 650 57.7
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 4.4e-190 668.7 625 57.8
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 7.5e-190 667.9 627 57.6
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.3e-189 667.2 635 58.6
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 2.9e-189 666.0 641 55.4
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.9e-189 665.2 639 54.8
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 4.9e-189 665.2 623 58.1
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 8.3e-189 664.5 646 56.5
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.4e-188 663.7 678 53.2
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 2.4e-188 662.9 488 65.2
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 5.4e-188 661.8 646 55.7
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 3.5e-187 659.1 627 57.3
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 5.0e-186 655.2 637 56.0
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 5.0e-186 655.2 635 55.4
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.5e-185 653.7 626 56.1
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.5e-185 652.9 638 56.0
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 5.6e-185 651.7 649 55.6
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 7.3e-185 651.4 637 53.7
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.8e-184 649.4 626 55.9
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 2.8e-184 649.4 649 55.3
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.3e-181 640.6 658 55.2
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 2.9e-181 639.4 644 54.5
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.4e-181 638.3 642 55.0
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 3.2e-180 636.0 634 56.0
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 4.1e-180 635.6 639 55.2
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.2e-180 634.4 629 55.6
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.2e-179 634.0 657 52.5
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 1.2e-179 634.0 637 55.9
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 1.2e-179 634.0 656 56.6
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 2.1e-179 633.3 640 54.4
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 2.1e-179 633.3 610 55.6
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 7.8e-179 631.3 625 56.3
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 1.0e-178 630.9 641 54.0
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.7e-178 630.2 616 56.5
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 3.9e-178 629.0 648 53.4
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 1.1e-177 627.5 680 53.7
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-177 627.1 491 60.9
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.5e-177 627.1 491 60.9
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 2.5e-177 626.3 634 55.5
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 3.3e-177 625.9 680 53.7
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 9.5e-177 624.4 483 63.1
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.5e-177 624.4 633 53.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 1.6e-176 623.6 432 68.5
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 4.7e-176 622.1 640 53.1
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 4.7e-176 622.1 640 54.4
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 3.1e-175 619.4 645 52.6
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 3.1e-175 619.4 479 61.0
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.2e-174 617.5 633 54.3
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 4.4e-174 615.5 507 59.4
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 4.4e-174 615.5 633 55.5
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 9.9e-174 614.4 633 53.2
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.2e-173 613.2 589 56.5
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.9e-173 612.8 633 52.9
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 4.9e-173 612.1 656 54.4
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 4.1e-172 609.0 640 53.0
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 9.2e-172 607.8 640 54.4
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 9.2e-172 607.8 640 54.4
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 9.2e-172 607.8 644 54.7
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.2e-171 607.4 627 53.9
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.7e-171 606.3 641 53.8
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 4.6e-171 605.5 645 53.6
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 4.6e-171 605.5 637 51.5
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 3.0e-170 602.8 501 59.1
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 6.6e-170 601.7 645 53.8
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 6.6e-170 601.7 637 52.3
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 3.3e-169 599.4 632 52.2
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 4.3e-169 599.0 650 53.4
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 7.3e-169 598.2 632 54.9
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 6.8e-167 591.7 640 51.6
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 4.4e-166 589.0 640 52.2
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 6.4e-165 585.1 480 61.0
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.0e-163 578.6 458 59.4
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 2.4e-156 556.6 644 50.8
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 9.3e-156 554.7 647 51.2
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.2e-155 554.3 628 50.0
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 1.6e-155 553.9 548 53.6
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 8.1e-152 541.6 631 49.3
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.4e-143 514.2 387 63.0
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 3.8e-133 479.6 635 44.7
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.9e-132 477.2 354 65.3
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 7.4e-129 465.3 492 48.8
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 1.5e-121 441.0 463 48.2
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 6.3e-120 435.6 448 50.7
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 5.3e-119 432.6 421 50.6
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.2e-118 431.4 354 59.3
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 2.6e-113 413.7 494 43.9
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 1.7e-112 411.0 597 43.7
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 7.0e-87 325.9 673 30.9
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.4e-82 311.6 527 35.9
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 7.8e-62 242.7 488 31.6
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 6.2e-51 206.5 501 28.9
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 4.4e-49 200.3 413 32.0
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-28 132.5 97 62.9
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 1.1e-28 132.5 97 62.9
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 6.2e-27 126.7 97 60.8


User provided reference genes

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