Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 5.6e-66 254.2 136 100.0
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.5e-60 235.0 161 82.6
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 1.7e-38 162.9 115 72.2
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.7e-36 155.6 112 73.2
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.7e-36 155.6 112 72.3
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 5.1e-35 151.4 112 71.4
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 5.1e-35 151.4 112 71.4
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 5.1e-35 151.4 112 71.4
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.9e-34 149.4 112 70.5
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.9e-34 149.4 111 72.1
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.9e-34 149.4 111 72.1
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 3.3e-34 148.7 114 73.7
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 4.3e-34 148.3 111 72.1
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 7.4e-34 147.5 112 68.8
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 7.4e-34 147.5 116 70.7
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.1e-33 146.0 112 71.4
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 3.7e-33 145.2 112 70.5
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 3.7e-33 145.2 111 69.4
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 4.8e-33 144.8 103 70.9
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 6.2e-33 144.4 111 68.5
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 8.2e-33 144.1 112 69.6
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.1e-32 143.7 175 50.3
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 2.4e-32 142.5 112 68.8
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 3.1e-32 142.1 115 67.0
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 4.0e-32 141.7 112 68.8
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 6.9e-32 141.0 112 65.2
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.5e-31 139.8 111 69.4
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.0e-31 139.4 114 68.4
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 3.4e-31 138.7 114 68.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 3.4e-31 138.7 112 67.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 3.4e-31 138.7 112 69.6
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 3.4e-31 138.7 115 67.8
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 4.5e-31 138.3 115 69.6
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 7.6e-31 137.5 114 65.8
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 1.0e-30 137.1 114 66.7
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.0e-30 137.1 112 67.9
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.3e-30 136.7 112 68.8
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.7e-30 136.3 113 69.9
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.7e-30 136.3 113 69.9
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.2e-30 136.0 119 64.7
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.2e-30 136.0 83 86.7
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 2.2e-30 136.0 114 66.7
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.9e-30 135.6 112 65.2
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 4.9e-30 134.8 112 68.8
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 8.4e-30 134.0 102 73.5
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 8.4e-30 134.0 112 63.4
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.9e-29 132.9 114 66.7
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 3.2e-29 132.1 118 59.3
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 5.5e-29 131.3 112 65.2
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.5e-29 131.3 108 69.4
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 9.3e-29 130.6 113 64.6
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.6e-28 129.8 91 73.6
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 2.1e-28 129.4 113 65.5
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.5e-28 128.6 110 64.5
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 3.5e-28 128.6 114 61.4
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 3.5e-28 128.6 104 67.3
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 4.6e-28 128.3 102 66.7
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 6.0e-28 127.9 121 62.0
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 7.9e-28 127.5 116 61.2
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.0e-27 127.1 113 65.5
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.0e-27 127.1 113 65.5
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.0e-27 127.1 113 65.5
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.3e-27 126.7 114 64.0
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.3e-27 125.9 114 64.9
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.0e-27 125.6 113 64.6
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 3.9e-27 125.2 89 75.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 8.7e-27 124.0 89 73.0
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 8.7e-27 124.0 89 73.0
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 8.7e-27 124.0 89 73.0
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 8.7e-27 124.0 119 62.2
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.5e-26 123.2 107 67.3
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 1.5e-26 123.2 112 61.6
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.9e-26 122.9 110 66.4
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.9e-26 122.9 114 61.4
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 1.9e-26 122.9 112 63.4
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 2.5e-26 122.5 89 73.0
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.3e-26 122.1 125 58.4
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 3.3e-26 122.1 98 68.4
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 3.3e-26 122.1 114 61.4
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.3e-26 122.1 75 81.3
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 7.4e-26 120.9 112 63.4
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.7e-25 118.6 177 45.8
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.8e-25 118.2 133 54.9
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 8.2e-25 117.5 90 70.0
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.1e-24 117.1 110 60.0
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.1e-24 117.1 110 60.0
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.1e-24 117.1 110 60.0
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.4e-24 116.7 110 59.1
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 1.8e-24 116.3 65 90.8
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 2.4e-24 115.9 110 59.1
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 3.1e-24 115.5 186 44.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 3.1e-24 115.5 110 59.1
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 6.9e-24 114.4 125 55.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 6.9e-24 114.4 110 58.2
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 6.9e-24 114.4 110 58.2
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 6.9e-24 114.4 117 58.1
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 9.0e-24 114.0 110 58.2
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 9.0e-24 114.0 110 58.2
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 9.0e-24 114.0 165 46.7
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.2e-23 113.6 164 44.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 1.2e-23 113.6 156 48.7
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 4.5e-23 111.7 110 57.3
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 4.5e-23 111.7 110 57.3
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 3.8e-22 108.6 63 82.5
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 5.0e-22 108.2 135 51.9
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 5.0e-22 108.2 116 55.2
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.1e-21 107.1 110 55.5
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.1e-21 107.1 63 81.0
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.4e-21 106.7 110 54.5
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.4e-21 106.7 91 62.6
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.9e-21 106.3 102 59.8
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.9e-21 106.3 60 86.7
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.5e-21 105.9 108 56.5
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 3.2e-21 105.5 111 55.0
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.2e-21 105.1 88 61.4
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 4.2e-21 105.1 123 55.3
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 2.7e-20 102.4 90 65.6
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.6e-20 102.1 81 69.1
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 8.8e-19 97.4 107 53.3
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.7e-17 93.2 79 62.0
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 4.8e-17 91.7 67 70.1
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.1e-16 90.5 113 48.7
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 3.4e-15 85.5 95 52.6
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.4e-15 85.5 199 35.2
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 4.7e-12 75.1 57 64.9
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 2.0e-10 69.7 59 57.6
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 2.6e-10 69.3 83 50.6
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 4.8e-09 65.1 183 35.5
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.4e-08 62.8 82 45.1
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 1.7e-06 56.6 90 38.9
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 6.5e-06 54.7 48 56.2


User provided reference genes

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