Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.5e-132 476.1 232 100.0
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.4e-78 294.7 217 64.5
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.1e-73 279.6 149 90.6
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.9e-71 270.8 149 85.2
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.3e-67 260.4 152 79.6
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.6e-58 228.4 127 80.3
AUR62015891 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.3e-43 179.9 157 58.6
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.2e-33 144.8 263 36.5
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 9.0e-32 141.4 224 39.7
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.5e-31 139.0 227 39.2
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 5.8e-31 138.7 214 38.3
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.0e-27 126.3 216 36.6
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.3e-26 122.9 157 46.5
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.3e-25 120.9 155 46.5
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.6e-25 120.6 160 45.6
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 4.8e-25 119.0 154 42.9
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 4.8e-25 119.0 154 42.9
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 1.8e-24 117.1 151 42.4
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 3.1e-24 116.3 152 42.8
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 3.1e-24 116.3 152 42.8
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 4.1e-24 115.9 153 42.5
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 4.1e-24 115.9 153 42.5
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 9.0e-24 114.8 158 43.7
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-23 113.6 152 42.1
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 2.2e-22 110.2 221 33.5
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-22 109.4 165 40.0
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-22 109.4 159 41.5
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-22 109.4 159 41.5
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 1.9e-21 107.1 155 40.0
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.9e-21 107.1 164 38.4
AUR62020330 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.9e-21 107.1 164 38.4
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.9e-21 107.1 164 38.4
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.9e-21 107.1 164 38.4
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 5.5e-21 105.5 160 38.1
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.1e-20 103.6 157 40.1
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 4.6e-20 102.4 154 42.2
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-19 100.9 114 45.6
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 2.3e-19 100.1 155 38.7
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 1.1e-18 97.8 164 40.9
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 2.8e-17 93.2 148 39.2
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 1.4e-16 90.9 157 37.6
Ah.06g182150 Amaranthus hybridus HOM05D008188 ORTHO05D010325 7.7e-15 85.1 77 50.6
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.2e-14 83.6 154 35.7
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-14 82.8 136 37.5
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.4e-13 80.9 81 50.6
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 3.2e-13 79.7 143 35.0
Nitab4.5_0003180g0070 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.4e-11 74.3 249 27.7
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.9e-11 72.8 243 27.6
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 8.8e-11 71.6 155 30.3
Atru.chr11.2300 Acer truncatum HOM05D000862 ORTHO05D000943 1.1e-10 71.2 151 34.4
Eucgr.I02520 Eucalyptus grandis HOM05D000862 ORTHO05D000943 2.0e-10 70.5 202 31.2
Lsat_1_v5_gn_8_102601 Lactuca sativa HOM05D000041 ORTHO05D000452 2.6e-10 70.1 234 29.9
Nitab4.5_0002977g0140 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.2e-09 67.0 148 33.1
ECA232G1312 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.8e-09 65.9 232 28.9
HanXRQChr11g0352391 Helianthus annuus HOM05D000862 ORTHO05D000943 4.8e-09 65.9 145 35.9
Nitab4.5_0002616g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.1e-08 64.7 271 25.5
Lsat_1_v5_gn_8_102541 Lactuca sativa HOM05D000862 ORTHO05D000452 1.8e-08 63.9 232 25.9
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.1e-08 63.2 158 26.6
ECA232G2716 Erigeron canadensis HOM05D000862 ORTHO05D000452 4.1e-08 62.8 190 28.9
Ah.04g166240 Amaranthus hybridus HOM05D008188 ORTHO05D010325 5.3e-08 62.4 59 47.5
HanXRQChr08g0212671 Helianthus annuus HOM05D000862 ORTHO05D000943 7.0e-08 62.0 153 31.4
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 9.1e-08 61.6 87 46.0
Ah.04g166210 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.2e-07 61.2 61 45.9
Lsat_1_v5_gn_0_36281 Lactuca sativa HOM05D000862 ORTHO05D000943 2.0e-07 60.5 148 29.1
PGSC0003DMG404017205 Solanum tuberosum HOM05D000862 ORTHO05D000943 3.4e-07 59.7 132 33.3
ECA232G0731 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.5e-07 59.3 220 27.7
Nitab4.5_0005317g0020 Nicotiana tabacum HOM05D000862 ORTHO05D000943 5.9e-07 58.9 172 28.5
Eucgr.I02524 Eucalyptus grandis HOM05D000862 ORTHO05D000943 7.7e-07 58.5 210 26.7
Ah.04g166330 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.0e-06 58.2 57 45.6
Lsat_1_v5_gn_7_30001 Lactuca sativa HOM05D000862 ORTHO05D000943 1.0e-06 58.2 132 28.0
Peaxi162Scf00417g01349 Petunia axillaris HOM05D000862 ORTHO05D000943 1.0e-06 58.2 162 33.3
Ah.04g166230 Amaranthus hybridus HOM05D008188 ORTHO05D010325 1.3e-06 57.8 59 49.2
Nitab4.5_0002977g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.3e-06 57.8 273 24.9
Os11g0607900 Oryza sativa ssp. japonica HOM05D000022 ORTHO05D000452 1.3e-06 57.8 128 31.2
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.3e-06 57.8 198 31.3
Os11g0524900 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 1.7e-06 57.4 181 27.1
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.2e-06 57.0 88 39.8
Lsat_1_v5_gn_1_17740 Lactuca sativa HOM05D000862 ORTHO05D000943 2.2e-06 57.0 150 30.7
Solyc09g090445.1 Solanum lycopersicum HOM05D000862 ORTHO05D000943 2.2e-06 57.0 125 35.2
Sopen09g033370 Solanum pennellii HOM05D000862 ORTHO05D000943 2.2e-06 57.0 125 35.2
HanXRQChr02g0042151 Helianthus annuus HOM05D000862 ORTHO05D000943 3.8e-06 56.2 147 32.0
Peaxi162Scf00417g01331 Petunia axillaris HOM05D000862 ORTHO05D000943 6.5e-06 55.5 150 31.3


User provided reference genes

Program Settings