Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010277 Chenopodium quinoa HOM05D007150 ORTHO05D008994 2.4e-86 322.8 259 100.0
AUR62013256 Chenopodium quinoa HOM05D007150 ORTHO05D008994 9.6e-67 257.7 256 84.4
AUR62044359 Chenopodium quinoa HOM05D007150 ORTHO05D008994 9.6e-67 257.7 256 84.4
EL10Ac9g22300 Beta vulgaris HOM05D007150 ORTHO05D008994 5.9e-48 195.3 193 70.5
CiPaw.05G010400 Carya illinoinensis HOM05D007150 ORTHO05D008994 2.0e-43 180.3 187 52.4
Manes.07G069300 Manihot esculenta HOM05D007150 ORTHO05D008994 5.0e-39 165.6 187 55.6
Sabra16G0189500 Salix brachista HOM05D007150 ORTHO05D008994 6.5e-39 165.2 192 54.7
CANSAT25G0571 Cannabis sativa HOM05D007150 ORTHO05D008994 8.5e-39 164.9 187 57.2
Nitab4.5_0002815g0080 Nicotiana tabacum HOM05D007150 ORTHO05D008994 1.4e-38 164.1 187 50.3
Potri.001G301400 Populus trichocarpa HOM05D007150 ORTHO05D008994 2.5e-38 163.3 187 56.7
Potri.009G097100 Populus trichocarpa HOM05D007150 ORTHO05D008994 5.5e-38 162.2 186 54.8
Cc02_g19160 Coffea canephora HOM05D007150 ORTHO05D008994 7.2e-38 161.8 187 48.7
Nitab4.5_0005392g0010 Nicotiana tabacum HOM05D007150 ORTHO05D008994 9.4e-38 161.4 187 56.1
MSTRG.16718 Avicennia marina HOM05D007150 ORTHO05D008994 1.6e-37 160.6 189 50.8
Nn1g04720 Nelumbo nucifera HOM05D007150 ORTHO05D008994 1.6e-37 160.6 187 51.9
Rhsim11G0160700 Rhododendron simsii HOM05D007150 ORTHO05D008994 2.1e-37 160.2 185 53.5
Cfa004568 Carpinus fangiana HOM05D007150 ORTHO05D008994 2.3e-36 156.8 187 48.7
Haze_10159 Corylus avellana HOM05D007150 ORTHO05D008994 3.0e-36 156.4 187 54.0
Hma1.2p1_0796F.1_g219100 Hydrangea macrophylla HOM05D007150 ORTHO05D008994 3.0e-36 156.4 187 55.6
Aqoxy5G01157 Aquilegia oxysepala HOM05D007150 ORTHO05D008994 8.8e-36 154.8 183 50.8
CSS0037176 Camellia sinensis var. sinensis HOM05D007150 ORTHO05D008994 2.6e-35 153.3 187 46.0
Duzib052G1025 Durio zibethinus HOM05D007150 ORTHO05D008994 7.4e-35 151.8 190 46.3
Ca_11085_v3 Cicer arietinum L. HOM05D007150 ORTHO05D008994 2.2e-34 150.2 190 44.7
Migut.B00379 Erythranthe guttata HOM05D007150 ORTHO05D008994 6.3e-34 148.7 191 48.2
HanXRQChr16g0513181 Helianthus annuus HOM05D007150 ORTHO05D008994 1.1e-33 147.9 192 44.8
MBI16_g31755_MAGBIO Magnolia biondii HOM05D007150 ORTHO05D008994 1.1e-33 147.9 192 44.3
Nn5g30403 Nelumbo nucifera HOM05D007150 ORTHO05D008994 1.1e-33 147.9 186 56.5
CAN.G1231.13 Capsicum annuum HOM05D007150 ORTHO05D008994 1.4e-33 147.5 187 46.0
Gohir.A01G007800 Gossypium hirsutum HOM05D007150 ORTHO05D008994 5.3e-33 145.6 191 52.9
Glyma.10G263200 Glycine max HOM05D007150 ORTHO05D008994 2.6e-32 143.3 193 45.1
Dinv15755 Davidia involucrata HOM05D007150 ORTHO05D008994 4.5e-32 142.5 187 53.5
Sc08g0001480 Simmondsia chinensis HOM05D007150 ORTHO05D008994 4.5e-32 142.5 189 43.4
Sabra09G0074700 Salix brachista HOM05D007150 ORTHO05D008994 1.7e-31 140.6 186 51.1
SGA_v2.0_scaffold32G13043 Striga asiatica HOM05D007150 ORTHO05D008994 1.7e-31 140.6 189 42.3
Atru.chr5.2575 Acer truncatum HOM05D007150 ORTHO05D008994 2.2e-31 140.2 187 54.0
Lj9P321T37 Lonicera japonica HOM05D007150 ORTHO05D008994 2.9e-31 139.8 187 52.4
Lj5P213T31 Lonicera japonica HOM05D007150 ORTHO05D008994 3.8e-31 139.4 187 52.4
TWI75G0581 Tripterygium wilfordii HOM05D007150 ORTHO05D008994 5.0e-31 139.0 187 51.3
Glyma.20G127300 Glycine max HOM05D007150 ORTHO05D008994 6.5e-31 138.7 196 41.3
Lj5g0008538 Lotus japonicus HOM05D007150 ORTHO05D008994 8.5e-31 138.3 188 42.0
VMungo0720G0738 Vigna mungo HOM05D007150 ORTHO05D008994 8.5e-31 138.3 193 40.4
Gorai.002G009100 Gossypium raimondii HOM05D007150 ORTHO05D008994 1.1e-30 137.9 193 51.3
ClCG02G006250 Citrullus lanatus HOM05D007150 ORTHO05D008994 1.9e-30 137.1 192 50.5
Duzib132G0401 Durio zibethinus HOM05D007150 ORTHO05D008994 2.5e-30 136.7 187 53.5
Gohir.D01G007950 Gossypium hirsutum HOM05D007150 ORTHO05D008994 5.5e-30 135.6 187 51.3
Medtr1g107500 Medicago truncatula HOM05D007150 ORTHO05D008994 5.5e-30 135.6 188 41.0
Prupe.8G133500 Prunus persica HOM05D007150 ORTHO05D008994 2.1e-29 133.7 173 52.0
Psat6g219760 Pisum sativum HOM05D007150 ORTHO05D008994 4.7e-29 132.5 183 41.0
TAR628G0324 Trochodendron aralioides HOM05D007150 ORTHO05D008994 4.7e-29 132.5 188 49.5
DCAR_021995 Daucus carota HOM05D007150 ORTHO05D008994 1.4e-28 131.0 188 46.3
COL.COLO4_32606 Corchorus olitorius HOM05D007150 ORTHO05D008994 1.8e-28 130.6 187 51.3
PGSC0003DMG400025867 Solanum tuberosum HOM05D007150 ORTHO05D008994 1.8e-28 130.6 187 53.5
Thecc.02G106600 Theobroma cacao HOM05D007150 ORTHO05D008994 1.8e-28 130.6 187 51.3
Phvul.007G038700 Phaseolus vulgaris HOM05D007150 ORTHO05D008994 2.3e-28 130.2 193 39.9
QL11p034059 Quercus lobata HOM05D007150 ORTHO05D008994 4.0e-28 129.4 190 51.1
Solyc01g107670.2 Solanum lycopersicum HOM05D007150 ORTHO05D008994 5.2e-28 129.0 187 51.3
Sopen01g049850 Solanum pennellii HOM05D007150 ORTHO05D008994 5.2e-28 129.0 187 51.3
MELO3C018480.2 Cucumis melo HOM05D007150 ORTHO05D008994 8.8e-28 128.3 193 49.2
FAN15G2804 Fragaria x ananassa HOM05D007150 ORTHO05D008994 8.8e-28 128.3 189 47.6
Peaxi162Scf00016g02223 Petunia axillaris HOM05D007150 ORTHO05D008994 1.2e-27 127.9 253 52.2
GSVIVG01003169001 Vitis vinifera HOM05D007150 ORTHO05D008994 4.4e-27 125.9 184 51.1
FvH4_2g05350 Fragaria vesca HOM05D007150 ORTHO05D008994 7.5e-27 125.2 189 47.1
FAN24G2604 Fragaria x ananassa HOM05D007150 ORTHO05D008994 7.5e-27 125.2 189 47.1
HanXRQChr10g0301561 Helianthus annuus HOM05D007150 ORTHO05D008994 2.4e-25 120.2 186 46.8
Lsat_1_v5_gn_5_114620 Lactuca sativa HOM05D007150 ORTHO05D008994 2.4e-25 120.2 192 46.9
RcHm_v2.0_Chr6g0255611 Rosa chinensis HOM05D007150 ORTHO05D008994 2.4e-25 120.2 189 46.6
FAN20G1091 Fragaria x ananassa HOM05D007150 ORTHO05D008994 3.1e-25 119.8 189 46.0
Gorai.013G046700 Gossypium raimondii HOM05D007150 ORTHO05D008994 4.1e-25 119.4 187 50.8
Gohir.A13G043300 Gossypium hirsutum HOM05D007150 ORTHO05D008994 5.3e-25 119.0 187 51.3
CsaV3_7G008270 Cucumis sativus L. HOM05D007150 ORTHO05D008994 1.2e-24 117.9 192 46.4
Gohir.D13G041800 Gossypium hirsutum HOM05D007150 ORTHO05D008994 2.7e-24 116.7 187 50.3
PGR042G2178 Punica granatum HOM05D007150 ORTHO05D008994 2.7e-24 116.7 188 46.3
HanXRQChr10g0301551 Helianthus annuus HOM05D007150 ORTHO05D008994 4.5e-24 115.9 184 38.6
CDE02G3472 Ceratophyllum demersum HOM05D007150 ORTHO05D008994 2.2e-23 113.6 188 45.7
Thhalv10022724m.g Eutrema salsugineum HOM05D007150 ORTHO05D008994 5.0e-23 112.5 188 46.3
THA.LOC104807835 Tarenaya hassleriana HOM05D007150 ORTHO05D008994 6.5e-23 112.1 189 46.0
A09p10710 Brassica napus HOM05D007150 ORTHO05D008994 1.1e-22 111.3 190 45.3
BraA09t36716Z Brassica rapa HOM05D007150 ORTHO05D008994 1.1e-22 111.3 190 45.3
AL3G47080 Arabidopsis lyrata HOM05D007150 ORTHO05D008994 1.5e-22 110.9 188 45.7
Sed0024536 Sechium edule HOM05D007150 ORTHO05D008994 1.9e-22 110.5 194 45.9
SpUn0368_0010 Schrenkiella parvula HOM05D007150 ORTHO05D008994 2.5e-22 110.2 188 46.8
CARHR105700 Cardamine hirsuta HOM05D007150 ORTHO05D008994 5.5e-22 109.0 188 47.9
Eucgr.H03228 Eucalyptus grandis HOM05D007150 ORTHO05D008994 5.5e-22 109.0 254 50.8
Aa31LG8G13190 Aethionema arabicum HOM05D007150 ORTHO05D008994 7.2e-22 108.6 190 44.2
BcaB07g31791 Brassica carinata HOM05D007150 ORTHO05D008994 1.6e-21 107.5 188 46.3
MD05G1087700 Malus domestica HOM05D007150 ORTHO05D008994 1.6e-21 107.5 171 48.5
AT2G15320 Arabidopsis thaliana HOM05D007150 ORTHO05D008994 4.7e-21 105.9 188 45.7
TPR.G27772 Trifolium pratense HOM05D007150 ORTHO05D008994 6.1e-21 105.5 161 41.0
BcaC04g23049 Brassica carinata HOM05D007150 ORTHO05D008994 2.3e-20 103.6 189 47.6
BolC9t54160H Brassica oleracea HOM05D007150 ORTHO05D008994 2.3e-20 103.6 189 47.6
Carub.0003s2921 Capsella rubella HOM05D007150 ORTHO05D008994 2.3e-20 103.6 187 42.8
Hma1.2p1_0474F.1_g160660 Hydrangea macrophylla HOM05D007150 ORTHO05D008994 2.3e-20 103.6 187 42.2
Lalb_Chr21g0308401 Lupinus albus HOM05D007150 ORTHO05D008994 3.0e-20 103.2 184 46.2
C09p12710 Brassica napus HOM05D007150 ORTHO05D008994 4.0e-20 102.8 189 47.6
Oeu013742.1 Olea europaea HOM05D007150 ORTHO05D008994 5.2e-20 102.4 187 46.0
HanXRQChr03g0070241 Helianthus annuus HOM05D007150 ORTHO05D008994 6.8e-20 102.1 183 44.8
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 3.4e-19 99.8 97 70.1
HanXRQChr09g0250571 Helianthus annuus HOM05D007150 ORTHO05D008994 5.7e-19 99.0 186 44.6
Ciclev10030023m.g Citrus clementina HOM05D007150 ORTHO05D008994 9.8e-19 98.2 187 50.3
SalBow6G1098 Salvia bowleyana HOM05D007150 ORTHO05D008994 6.3e-18 95.5 166 44.0
ATR0724G003 Amborella trichopoda HOM05D007150 ORTHO05D008994 8.3e-18 95.1 186 32.8
Lsat_1_v5_gn_9_111460 Lactuca sativa HOM05D007150 ORTHO05D008994 2.4e-17 93.6 192 43.2
PSO170G4206 Papaver somniferum HOM05D007150 ORTHO05D008994 3.5e-16 89.7 67 58.2
SEGI_19656 Sequoiadendron giganteum HOM05D004495 ORTHO05D005361 3.5e-16 89.7 259 29.7
Cpa.g.sc106.82 Carica papaya HOM05D007150 ORTHO05D008994 1.3e-15 87.8 187 42.2
PSO210G4027 Papaver somniferum HOM05D007150 ORTHO05D008994 1.7e-15 87.4 67 56.7
HanXRQChr10g0301541 Helianthus annuus HOM05D007150 ORTHO05D008994 3.2e-09 66.6 184 40.2
SEGI_39952 Sequoiadendron giganteum HOM05D004495 ORTHO05D005361 5.0e-07 59.3 190 23.7
HanXRQChr11g0325661 Helianthus annuus HOM05D004495 ORTHO05D005361 1.5e-06 57.8 182 28.6
ECA232G3045 Erigeron canadensis HOM05D004495 ORTHO05D005361 1.9e-06 57.4 197 27.9
HanXRQChr09g0260791 Helianthus annuus HOM05D004495 ORTHO05D005361 3.3e-06 56.6 191 30.4
AT3G59510 Arabidopsis thaliana HOM05D007768 ORTHO05D009831 5.6e-06 55.8 178 27.0
TWI15G0176 Tripterygium wilfordii HOM05D007768 ORTHO05D009831 5.6e-06 55.8 117 34.2
SEGI_31027 Sequoiadendron giganteum HOM05D004495 ORTHO05D008994 7.3e-06 55.5 175 25.1


User provided reference genes

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