Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 7.7e-217 756.9 393 100.0
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 6.8e-197 690.6 390 93.6
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.5e-159 566.6 368 81.2
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 9.6e-127 457.6 369 65.9
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 1.2e-124 450.7 303 75.9
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 2.7e-121 439.5 335 68.4
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.5e-119 433.7 308 71.4
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 3.3e-119 432.6 340 65.9
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 3.3e-119 432.6 336 69.9
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 5.7e-119 431.8 303 72.9
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.3e-118 430.6 320 68.4
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.6e-118 430.3 358 63.1
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.6e-118 430.3 327 67.3
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.7e-118 429.1 324 69.8
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 6.3e-118 428.3 327 67.3
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.4e-117 427.2 331 68.0
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.4e-117 427.2 304 71.4
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 1.8e-117 426.8 308 71.8
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 2.4e-117 426.4 304 71.7
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 3.1e-117 426.0 308 69.5
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 4.1e-117 425.6 337 66.8
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 1.2e-116 424.1 322 69.3
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 1.5e-116 423.7 366 62.0
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 5.9e-116 421.8 308 70.5
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 1.3e-115 420.6 310 69.0
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 2.2e-115 419.9 347 64.6
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 2.9e-115 419.5 341 66.3
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 3.8e-115 419.1 308 69.2
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 5.0e-115 418.7 341 64.8
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 6.5e-115 418.3 334 66.5
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.4e-114 417.2 308 67.5
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 1.9e-114 416.8 322 66.8
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.9e-114 416.8 303 68.3
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.5e-114 416.4 351 64.4
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 3.2e-114 416.0 365 62.7
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 3.2e-114 416.0 336 64.6
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 4.2e-114 415.6 336 64.6
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 5.5e-114 415.2 322 64.6
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 5.5e-114 415.2 314 67.8
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 5.5e-114 415.2 364 61.3
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 9.3e-114 414.5 351 64.4
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 1.2e-113 414.1 345 62.0
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 2.7e-113 412.9 351 64.1
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 3.6e-113 412.5 345 61.4
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 3.6e-113 412.5 313 67.4
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 7.9e-113 411.4 308 68.5
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 7.9e-113 411.4 364 59.9
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 1.0e-112 411.0 324 65.7
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.3e-112 410.6 341 61.6
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 1.8e-112 410.2 361 62.6
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 2.3e-112 409.8 308 68.2
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 3.0e-112 409.5 308 68.2
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 5.1e-112 408.7 314 67.5
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 6.7e-112 408.3 308 68.2
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 8.7e-112 407.9 309 67.3
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 1.1e-111 407.5 311 66.9
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 2.5e-111 406.4 314 65.9
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 1.6e-110 403.7 328 65.2
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.6e-110 403.7 326 63.8
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 3.7e-110 402.5 320 64.7
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 6.3e-110 401.7 336 62.2
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 6.3e-110 401.7 323 63.8
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.4e-109 400.6 306 66.7
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.4e-109 400.6 306 66.7
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 1.8e-109 400.2 330 62.1
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 1.8e-109 400.2 351 60.4
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.2e-108 397.5 310 63.9
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 1.2e-108 397.5 331 63.4
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 1.5e-108 397.1 330 62.1
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 2.0e-108 396.7 306 66.3
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 2.0e-108 396.7 306 66.3
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 2.6e-108 396.4 333 63.4
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 3.4e-108 396.0 329 61.7
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 5.9e-108 395.2 304 66.8
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 5.9e-108 395.2 306 66.7
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 7.7e-108 394.8 315 63.5
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 1.9e-106 390.2 322 64.3
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.0e-104 384.4 329 61.4
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 2.6e-103 379.8 311 65.0
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 2.6e-103 379.8 293 66.9
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 9.7e-103 377.9 345 58.3
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 1.7e-102 377.1 336 62.2
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 2.2e-102 376.7 336 62.2
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 3.1e-101 372.9 276 68.8
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 4.1e-101 372.5 308 64.3
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 5.3e-101 372.1 280 68.2
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 5.5e-98 362.1 322 59.3
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 7.9e-97 358.2 321 58.9
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 1.5e-95 354.0 319 56.7
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 2.2e-94 350.1 213 83.1
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 7.0e-93 345.1 355 54.6
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 1.7e-91 340.5 310 59.7
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 2.7e-89 333.2 246 70.7
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 3.6e-89 332.8 310 55.5
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.4e-88 330.9 333 55.9
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 3.0e-88 329.7 312 55.8
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.3e-86 324.3 285 59.3
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.7e-86 323.9 354 54.2
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 4.8e-86 322.4 336 52.4
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.6e-84 317.4 300 56.0
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 2.1e-81 307.0 220 70.0
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 5.7e-79 298.9 300 55.7
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 5.0e-75 285.8 229 64.6
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.4e-71 273.1 194 70.1
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 9.2e-69 265.0 329 47.7
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 2.7e-68 263.5 350 47.4
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 1.0e-67 261.5 228 61.8
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 3.7e-62 243.0 278 53.2
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.9e-62 242.7 327 45.9
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 2.3e-59 233.8 273 46.5
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 1.7e-54 217.6 302 43.0
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 2.3e-51 207.2 175 59.4
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.2e-46 190.7 295 44.4
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 4.9e-46 189.5 339 38.3
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 7.6e-39 165.6 126 65.9
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 6.0e-28 129.4 102 65.7
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 6.0e-28 129.4 102 65.7
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.3e-25 121.7 104 61.5
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 4.5e-23 113.2 107 57.9
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 2.1e-20 104.4 96 56.2
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 2.1e-20 104.4 96 56.2
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.8e-19 101.3 96 54.2
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 6.7e-19 99.4 90 55.6
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 8.4e-14 82.4 93 52.7
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.3e-11 74.3 53 67.9
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 2.4e-08 64.3 79 44.3


User provided reference genes

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