Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 7.7e-175 617.1 318 100.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.4e-112 409.5 242 84.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 3.5e-111 405.6 230 90.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 8.7e-102 374.4 248 77.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.1e-101 374.0 242 75.6
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.5e-101 373.6 242 75.2
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.9e-101 373.2 242 75.6
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 5.6e-101 371.7 242 76.4
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.8e-100 369.4 242 75.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.6e-100 369.0 242 75.6
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.1e-99 367.5 242 74.4
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.1e-99 367.5 240 75.0
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.1e-99 367.5 242 74.8
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-99 367.1 242 75.2
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.8e-99 366.7 242 74.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.8e-99 366.7 242 76.0
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.8e-99 366.7 240 74.2
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.4e-99 366.3 242 75.2
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 6.9e-99 364.8 242 73.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.5e-98 363.6 241 73.9
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.5e-98 363.6 240 74.6
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 7.6e-98 361.3 241 74.7
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 7.6e-98 361.3 242 73.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 4.9e-97 358.6 242 74.0
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 4.9e-97 358.6 242 73.1
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 6.4e-97 358.2 242 73.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.4e-97 358.2 242 72.7
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 8.4e-97 357.8 242 71.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.1e-96 357.5 242 73.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.4e-96 357.1 242 73.1
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.4e-96 357.1 242 72.7
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.9e-96 356.7 242 72.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.9e-96 356.7 242 72.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 2.4e-96 356.3 242 72.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 5.4e-96 355.1 242 72.3
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 9.3e-96 354.4 248 71.4
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 9.3e-96 354.4 242 71.1
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.6e-95 353.6 242 72.7
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.6e-95 353.6 242 72.3
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.7e-95 352.8 242 72.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.7e-95 352.8 240 72.1
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.7e-95 352.8 240 72.1
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 4.6e-95 352.1 248 71.0
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.6e-95 352.1 242 72.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 7.9e-95 351.3 242 71.1
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 7.9e-95 351.3 242 70.7
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.0e-94 350.9 242 72.3
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.0e-94 350.9 242 71.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.0e-94 350.9 242 70.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.3e-94 350.5 242 70.7
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.3e-94 350.5 242 72.7
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.8e-94 350.1 242 70.7
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.3e-94 349.7 242 70.7
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 3.9e-94 349.0 262 65.6
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 3.9e-94 349.0 262 65.6
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 3.9e-94 349.0 242 70.7
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 3.9e-94 349.0 242 71.9
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 6.7e-94 348.2 242 71.1
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 6.7e-94 348.2 242 70.7
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 8.7e-94 347.8 242 71.5
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 8.7e-94 347.8 242 70.2
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 1.1e-93 347.4 242 70.7
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.1e-93 347.4 263 67.3
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.5e-93 347.1 242 70.7
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.5e-93 347.1 244 70.5
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.9e-93 346.7 242 72.3
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.9e-93 346.7 242 71.5
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.9e-93 346.7 240 70.0
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.3e-93 345.5 242 70.2
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 7.4e-93 344.7 265 65.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 9.6e-93 344.4 244 70.5
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 9.6e-93 344.4 244 70.5
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.6e-93 344.4 250 69.2
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 9.6e-93 344.4 240 69.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.3e-92 344.0 244 70.5
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.6e-92 343.6 244 70.5
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 2.1e-92 343.2 242 69.0
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 3.7e-92 342.4 244 69.7
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 4.8e-92 342.0 244 70.1
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 6.2e-92 341.7 244 69.7
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 5.3e-91 338.6 244 69.7
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.2e-90 337.4 244 69.3
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.5e-90 337.0 244 69.3
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 2.0e-90 336.7 244 68.9
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 5.8e-90 335.1 244 68.9
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.3e-89 334.0 224 74.1
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.3e-86 323.9 248 65.7
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 3.0e-86 322.8 242 65.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.5e-85 320.5 238 66.8
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 5.6e-85 318.5 220 70.9
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.3e-84 317.4 209 75.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 2.8e-84 316.2 248 64.1
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.8e-84 316.2 242 65.3
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 3.7e-84 315.8 249 64.7
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.7e-78 295.0 248 62.1
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 2.8e-76 289.7 231 64.1
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.3e-73 280.8 248 57.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 5.0e-73 278.9 242 58.3
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.0e-70 271.2 221 62.4
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.6e-63 247.3 241 53.9
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.4e-62 244.2 255 52.2
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.1e-59 234.6 158 73.4
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 3.1e-59 233.0 241 53.9
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 8.5e-57 224.9 162 67.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 9.4e-56 221.5 244 50.0
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.0e-49 201.4 197 57.9
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.5e-48 195.7 143 70.6
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.4e-48 194.9 144 70.1
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-47 192.6 242 47.9
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.0e-46 189.5 143 68.5
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 4.0e-46 189.5 259 42.1
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.1e-39 165.6 143 64.3
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 5.4e-35 152.5 259 39.4
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 3.0e-30 136.7 262 35.9
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.2e-29 134.8 304 33.2
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.0e-29 134.0 148 52.7
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.8e-29 131.7 95 66.3
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 3.1e-27 126.7 129 47.3
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.9e-24 117.5 314 30.3
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 6.8e-22 109.0 242 35.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-17 94.4 53 79.2
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.1e-14 85.1 56 73.2
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 8.3e-12 75.5 40 82.5


User provided reference genes

Program Settings