Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.9e-104 382.1 225 100.0
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.4e-98 362.5 225 96.0
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 1.7e-67 260.0 227 64.8
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 4.2e-66 255.4 226 62.4
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.6e-52 209.5 251 51.0
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 5.8e-52 208.4 247 53.4
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.3e-51 207.2 245 62.0
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 8.4e-51 204.5 245 63.3
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 1.9e-50 203.4 246 51.2
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 4.2e-50 202.2 255 54.5
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 5.5e-50 201.8 242 60.3
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 1.2e-49 200.7 242 63.2
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 2.1e-49 199.9 242 62.4
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 2.1e-49 199.9 250 58.4
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 2.1e-49 199.9 251 49.4
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 2.7e-49 199.5 248 52.4
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 3.5e-49 199.1 258 58.9
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 6.0e-49 198.4 239 58.6
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 6.0e-49 198.4 250 55.6
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 6.0e-49 198.4 250 55.6
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 7.9e-49 198.0 249 61.8
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 7.9e-49 198.0 248 52.8
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.0e-48 197.6 245 50.6
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.0e-48 197.6 243 59.7
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.0e-48 197.6 245 54.3
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.3e-48 197.2 252 54.4
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.3e-48 196.4 248 53.6
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 2.3e-48 196.4 203 58.1
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.9e-48 195.7 191 57.6
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 5.1e-48 195.3 253 59.3
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 5.1e-48 195.3 246 60.2
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 5.1e-48 195.3 244 50.0
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.7e-48 194.5 239 56.5
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.1e-47 194.1 254 50.8
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.1e-47 194.1 245 55.1
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 1.5e-47 193.7 245 55.5
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 1.5e-47 193.7 248 58.5
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.5e-47 193.7 186 59.1
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 1.9e-47 193.4 251 56.6
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 2.5e-47 193.0 250 51.2
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 4.3e-47 192.2 185 58.4
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 5.6e-47 191.8 253 57.3
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 9.6e-47 191.0 244 48.8
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 9.6e-47 191.0 193 57.0
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 9.6e-47 191.0 248 59.3
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 9.6e-47 191.0 245 49.8
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 2.1e-46 189.9 238 48.3
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 2.8e-46 189.5 250 52.4
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.8e-46 189.5 239 56.9
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 2.8e-46 189.5 246 56.5
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 2.8e-46 189.5 246 53.7
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 3.7e-46 189.1 246 54.1
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 6.2e-46 188.3 248 54.4
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 8.1e-46 188.0 199 53.3
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.1e-46 188.0 246 47.6
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.1e-46 188.0 246 47.6
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 1.4e-45 187.2 246 58.5
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.4e-45 187.2 256 58.2
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.8e-45 186.8 243 49.0
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 4.0e-45 185.7 246 48.4
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 9.0e-45 184.5 186 56.5
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 2.0e-44 183.3 253 45.8
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 4.5e-44 182.2 248 50.0
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 7.6e-44 181.4 190 56.3
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.3e-43 180.6 247 46.6
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.7e-43 180.3 188 58.5
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.4e-42 177.2 268 48.1
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 3.2e-42 176.0 259 45.2
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 4.2e-42 175.6 273 45.4
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 4.2e-42 175.6 245 50.2
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 2.7e-41 172.9 255 46.3
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 3.5e-41 172.6 235 47.2
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 3.5e-41 172.6 218 51.8
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.0e-40 171.0 232 47.4
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.3e-40 170.6 237 52.7
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.8e-40 170.2 237 52.7
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 1.8e-40 170.2 236 52.5
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 2.3e-40 169.9 187 55.1
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 3.0e-40 169.5 235 47.7
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 3.9e-40 169.1 237 46.4
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 3.9e-40 169.1 236 46.6
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 6.7e-40 168.3 236 52.1
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 8.7e-40 167.9 235 49.8
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.1e-39 167.5 259 44.8
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 5.7e-39 165.2 237 46.4
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 7.4e-39 164.9 234 44.9
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 7.4e-39 164.9 183 52.5
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.6e-38 163.7 250 43.6
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 3.7e-38 162.5 276 48.9
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 4.8e-38 162.2 291 46.4
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.1e-37 161.0 242 47.1
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 2.4e-37 159.8 182 51.1
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.2e-36 157.5 177 52.5
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 1.2e-36 157.5 177 52.5
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 1.5e-36 157.1 187 50.8
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 1.5e-36 157.1 186 50.0
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 1.5e-36 157.1 119 67.2
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 2.6e-36 156.4 177 52.0
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 2.6e-36 156.4 177 56.5
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 7.6e-36 154.8 192 50.5
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-35 154.1 187 50.3
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 1.7e-35 153.7 239 53.1
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 2.2e-35 153.3 250 42.4
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 5.0e-35 152.1 187 49.7
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 5.0e-35 152.1 173 50.9
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 3.0e-32 142.9 182 46.2
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 4.3e-31 139.0 132 59.8
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.3e-31 139.0 138 57.2
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 5.7e-31 138.7 180 49.4
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.3e-30 137.5 138 56.5
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 6.9e-29 131.7 136 57.4
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.2e-28 131.0 205 42.9
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 2.6e-28 129.8 135 57.0
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 3.4e-28 129.4 244 39.3
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 2.5e-26 123.2 67 86.6
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 4.6e-25 119.0 242 36.4
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.3e-23 112.8 244 35.2
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 4.3e-23 112.5 209 37.8
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.3e-23 112.5 120 54.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 1.7e-22 110.5 184 42.4
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 4.8e-22 109.0 142 61.3
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 5.3e-21 105.5 142 55.6
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 7.7e-20 101.7 71 69.0
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 2.3e-16 90.1 145 41.4
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 6.7e-16 88.6 139 41.7
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 6.7e-16 88.6 144 38.2
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 2.8e-14 83.2 229 31.9
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.7e-11 73.9 86 44.2
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 1.6e-09 67.4 135 35.6
FAN15G2545 Fragaria x ananassa HOM05D005104 ORTHO05D006614 3.0e-08 63.2 113 57.5
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 4.4e-07 59.3 58 58.6


User provided reference genes

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