Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.1e-231 806.2 402 100.0
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.9e-210 735.7 399 91.5
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 5.7e-175 617.8 401 77.1
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 2.3e-147 526.2 404 65.6
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 2.7e-124 449.5 402 56.7
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 2.1e-121 439.9 400 56.5
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 2.3e-120 436.4 406 54.9
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 2.0e-119 433.3 406 54.7
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 9.9e-119 431.0 404 53.5
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.3e-118 430.6 403 53.8
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 4.9e-118 428.7 407 54.5
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 1.4e-117 427.2 403 54.6
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 2.4e-117 426.4 403 54.1
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 3.2e-117 426.0 399 54.1
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 1.2e-116 424.1 406 53.4
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 1.2e-116 424.1 406 53.4
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 1.2e-116 424.1 402 55.7
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 2.1e-116 423.3 399 54.6
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 2.7e-116 422.9 396 54.5
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 7.8e-116 421.4 383 56.1
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 1.7e-115 420.2 406 52.5
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 3.0e-115 419.5 406 54.2
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 3.9e-115 419.1 403 54.3
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 1.1e-114 417.5 402 52.5
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 1.1e-114 417.5 400 54.8
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 1.1e-114 417.5 393 53.2
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 1.1e-114 417.5 398 54.5
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 1.1e-114 417.5 399 53.4
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 1.5e-114 417.2 401 53.1
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 2.5e-114 416.4 404 54.5
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 4.3e-114 415.6 393 53.4
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 5.6e-114 415.2 400 55.2
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 9.6e-114 414.5 400 52.8
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 9.6e-114 414.5 394 53.0
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 1.2e-113 414.1 393 52.9
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 2.1e-113 413.3 393 54.2
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 4.7e-113 412.1 406 52.5
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 6.2e-113 411.8 401 54.1
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 8.1e-113 411.4 397 53.1
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 2.4e-112 409.8 400 54.0
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 2.4e-112 409.8 397 52.9
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 3.1e-112 409.5 399 53.1
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 8.9e-112 407.9 394 52.5
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 2.0e-111 406.8 393 52.7
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 2.0e-111 406.8 411 52.6
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 2.6e-111 406.4 406 51.7
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 3.4e-111 406.0 393 52.9
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 3.4e-111 406.0 394 53.0
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 3.4e-111 406.0 379 54.6
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 5.8e-111 405.2 369 55.3
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 7.6e-111 404.8 393 52.7
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 7.6e-111 404.8 397 52.4
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 9.9e-111 404.4 405 52.8
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 1.3e-110 404.1 395 52.7
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 1.3e-110 404.1 405 52.8
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.2e-110 403.3 400 52.2
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 3.8e-110 402.5 393 52.4
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 3.8e-110 402.5 383 52.7
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 1.1e-109 401.0 393 52.4
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 1.1e-109 401.0 393 52.4
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 1.4e-109 400.6 383 54.3
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 1.9e-109 400.2 393 52.2
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 2.4e-109 399.8 407 52.6
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 3.2e-109 399.4 405 50.9
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 5.4e-109 398.7 393 52.4
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 5.4e-109 398.7 393 52.4
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 2.7e-108 396.4 403 51.9
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 1.0e-107 394.4 401 52.1
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 1.7e-107 393.7 380 54.2
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 2.3e-107 393.3 402 52.5
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 3.0e-107 392.9 399 52.6
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 5.1e-107 392.1 411 50.1
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 1.1e-106 391.0 394 51.8
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 3.3e-106 389.4 401 52.1
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 7.3e-106 388.3 396 51.5
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 1.3e-105 387.5 408 50.7
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 2.1e-105 386.7 409 51.8
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 8.1e-105 384.8 409 52.1
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 1.1e-104 384.4 406 52.0
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 1.8e-104 383.6 406 51.2
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.1e-104 382.9 406 51.2
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 4.0e-104 382.5 411 50.4
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 5.8e-103 378.6 411 50.1
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 5.8e-103 378.6 380 52.6
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 1.3e-102 377.5 399 52.1
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 1.3e-102 377.5 400 52.2
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 1.7e-102 377.1 335 56.4
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 1.7e-102 377.1 400 51.0
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 3.8e-102 375.9 406 49.8
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 3.8e-102 375.9 400 52.2
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 6.4e-102 375.2 398 51.3
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 1.6e-100 370.5 403 49.4
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 1.0e-99 367.9 393 49.6
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 3.9e-99 365.9 400 48.2
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 8.7e-99 364.8 405 49.4
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 8.1e-97 358.2 381 49.6
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.2e-95 354.4 400 47.2
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 1.5e-95 354.0 376 51.1
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 1.7e-94 350.5 399 47.1
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.1e-93 347.8 406 46.6
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.4e-93 347.4 412 45.9
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 5.5e-93 345.5 394 47.7
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 5.6e-90 335.5 479 40.9
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 2.5e-85 320.1 402 45.8
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 1.6e-81 307.4 397 46.1
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 1.7e-78 297.4 403 42.7
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 3.7e-73 279.6 391 43.0
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.4e-72 276.9 299 51.8
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 1.1e-69 268.1 289 50.9
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 4.2e-61 239.6 384 38.3
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.8e-59 234.2 352 40.1
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 4.8e-57 226.1 268 44.4
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 2.2e-54 217.2 556 30.8
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 2.9e-54 216.9 271 43.5
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 2.0e-50 204.1 248 45.2
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 2.6e-50 203.8 262 43.5
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.7e-49 201.1 296 41.2
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 2.2e-46 190.7 126 73.0
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 8.0e-44 182.2 240 44.6
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.0e-39 167.5 146 58.9
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.5e-39 166.8 173 48.0
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.5e-39 166.8 173 48.0
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 3.0e-22 110.5 287 28.9
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 8.0e-20 102.4 172 35.5
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 1.4e-19 101.7 115 45.2
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 1.8e-19 101.3 191 31.9
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.2e-16 90.5 124 38.7
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 1.3e-14 85.1 62 64.5


User provided reference genes

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