Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.1e-206 723.0 356 100.0
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 3.6e-96 355.9 201 87.1
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 3.3e-94 349.4 283 63.6
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 7.0e-84 315.1 278 59.4
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 2.9e-74 283.1 278 54.7
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 3.2e-60 236.5 277 49.1
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 6.8e-55 218.8 277 44.8
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 3.2e-52 209.9 279 44.8
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 4.1e-52 209.5 273 45.4
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.2e-51 208.0 277 43.0
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 2.7e-51 206.8 278 42.4
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 3.0e-50 203.4 286 43.0
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 3.9e-50 203.0 283 41.0
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 3.9e-50 203.0 278 44.6
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.9e-49 200.7 278 44.2
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 5.6e-49 199.1 265 43.8
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.1e-48 197.2 280 42.5
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.1e-47 194.9 277 42.6
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 5.2e-47 192.6 275 40.7
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 6.8e-47 192.2 277 41.9
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 8.9e-47 191.8 276 42.0
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 8.9e-47 191.8 272 41.9
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 1.2e-46 191.4 273 43.2
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.5e-46 191.0 284 39.4
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 5.8e-46 189.1 276 41.7
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 7.6e-46 188.7 275 43.3
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 1.1e-44 184.9 291 39.2
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.9e-44 184.1 280 39.3
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 4.1e-44 183.0 277 41.5
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 5.4e-44 182.6 272 40.8
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 9.2e-44 181.8 277 41.9
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 9.2e-44 181.8 288 38.5
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 2.1e-43 180.6 281 39.9
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 4.6e-43 179.5 283 40.6
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 4.6e-43 179.5 283 40.6
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 6.0e-43 179.1 277 39.4
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.3e-42 177.9 274 40.1
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 3.9e-42 176.4 282 38.3
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 5.1e-42 176.0 274 40.1
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 6.6e-42 175.6 286 38.8
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 8.6e-42 175.3 212 44.3
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 3.3e-41 173.3 280 41.4
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 3.3e-41 173.3 280 40.7
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 4.3e-41 172.9 283 38.2
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 9.6e-41 171.8 270 38.5
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.2e-40 171.4 273 37.7
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 2.1e-40 170.6 273 41.0
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.8e-40 170.2 277 37.2
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 6.2e-40 169.1 279 36.2
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 1.1e-39 168.3 269 39.4
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 3.1e-39 166.8 277 38.6
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.2e-38 164.9 276 40.2
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 9.9e-38 161.8 270 37.8
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 2.2e-37 160.6 273 37.0
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 3.8e-37 159.8 220 40.9
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 6.4e-37 159.1 278 38.1
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 8.4e-37 158.7 276 38.8
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.9e-36 157.5 274 36.5
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 4.2e-36 156.4 228 41.2
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.2e-35 154.8 277 38.6
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.7e-35 153.7 272 36.0
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 3.5e-35 153.3 274 36.9
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 7.8e-35 152.1 272 38.6
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 7.8e-35 152.1 213 40.4
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.0e-34 151.8 285 36.1
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 1.3e-34 151.4 273 34.8
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 5.1e-34 149.4 285 35.8
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 1.1e-33 148.3 276 37.0
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.5e-33 147.1 279 34.8
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.5e-33 147.1 279 34.8
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.5e-33 147.1 277 35.4
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 3.3e-33 146.7 272 36.0
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 4.3e-33 146.4 287 35.5
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 7.3e-33 145.6 274 35.8
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 7.3e-33 145.6 281 35.9
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.3e-32 144.8 264 35.2
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.1e-32 144.1 251 39.0
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 4.8e-32 142.9 278 37.1
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 4.8e-32 142.9 277 32.9
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.8e-31 141.0 218 40.8
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 3.4e-30 136.7 301 32.2
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 4.5e-30 136.3 280 35.4
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 7.6e-30 135.6 290 34.1
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 7.6e-30 135.6 274 35.4
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.7e-29 134.4 162 46.9
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 1.1e-28 131.7 288 33.7
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 1.4e-28 131.3 167 47.9
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 3.5e-27 126.7 165 43.6
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.9e-25 120.9 297 31.0
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 4.5e-22 109.8 119 42.9
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 3.2e-20 103.6 214 32.2
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 7.4e-17 92.4 271 28.4
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.1e-15 87.0 179 33.5
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.3e-13 81.6 191 35.1
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 8.4e-13 79.0 261 29.5
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 1.4e-07 61.6 76 43.4
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 2.0e-06 57.8 82 45.1


User provided reference genes

Program Settings