Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009676 Chenopodium quinoa HOM05D006986 ORTHO05D008714 2.4e-88 328.9 179 100.0
AUR62001879 Chenopodium quinoa HOM05D006986 ORTHO05D008714 4.9e-62 241.5 172 83.1
EL10Ac7g15912 Beta vulgaris HOM05D000133 ORTHO05D000259 3.1e-48 195.7 176 66.5
Ah.08g215140 Amaranthus hybridus HOM05D006986 ORTHO05D008714 2.8e-41 172.6 178 56.2
Hund29010 Selenicereus undatus HOM05D006986 ORTHO05D008714 2.0e-34 149.8 192 58.9
Hund29014 Selenicereus undatus HOM05D006986 ORTHO05D008714 2.0e-34 149.8 192 58.9
CiPaw.13G069900 Carya illinoinensis HOM05D006986 ORTHO05D008714 4.1e-32 142.1 178 53.4
GSVIVG01024640001 Vitis vinifera HOM05D006986 ORTHO05D008714 1.2e-31 140.6 170 49.4
Cc01_g14800 Coffea canephora HOM05D006986 ORTHO05D008714 1.1e-29 134.0 175 52.0
Dinv28693 Davidia involucrata HOM05D006986 ORTHO05D008714 1.5e-29 133.7 175 48.6
Nitab4.5_0000758g0110 Nicotiana tabacum HOM05D006986 ORTHO05D008714 2.5e-29 132.9 178 44.9
TAR633G1018 Trochodendron aralioides HOM05D006986 ORTHO05D008714 3.2e-29 132.5 182 47.3
Sc21g0005260 Simmondsia chinensis HOM05D006986 ORTHO05D008714 9.4e-29 131.0 181 49.7
Sopen03g028830 Solanum pennellii HOM05D006986 ORTHO05D008714 9.4e-29 131.0 182 44.0
Nn2g10992 Nelumbo nucifera HOM05D006986 ORTHO05D008714 3.6e-28 129.0 170 52.4
PGSC0003DMG401031052 Solanum tuberosum HOM05D006986 ORTHO05D008714 4.7e-28 128.6 182 42.9
Thecc.09G357000 Theobroma cacao HOM05D006986 ORTHO05D008714 1.0e-27 127.5 181 47.5
Solyc03g098130.3 Solanum lycopersicum HOM05D006986 ORTHO05D008714 1.8e-27 126.7 182 42.9
Lj6g0005028 Lotus japonicus HOM05D006986 ORTHO05D008714 3.9e-27 125.6 167 42.5
Lalb_Chr15g0083221 Lupinus albus HOM05D006986 ORTHO05D008714 3.9e-27 125.6 167 45.5
CsaV3_1G036550 Cucumis sativus L. HOM05D006986 ORTHO05D008714 5.2e-27 125.2 174 47.7
Lsat_1_v5_gn_8_111400 Lactuca sativa HOM05D006986 ORTHO05D008714 1.1e-26 124.0 178 47.8
CAN.G637.24 Capsicum annuum HOM05D006986 ORTHO05D008714 2.6e-26 122.9 174 44.8
Duzib168G0630 Durio zibethinus HOM05D006986 ORTHO05D008714 9.7e-26 120.9 178 46.6
Oeu029417.1 Olea europaea HOM05D006986 ORTHO05D008714 9.7e-26 120.9 175 45.7
Sed0010409 Sechium edule HOM05D006986 ORTHO05D008714 2.8e-25 119.4 176 46.6
Actinidia23203 Actinidia chinensis HOM05D006986 ORTHO05D008714 3.7e-25 119.0 174 45.4
MELO3C020513.2 Cucumis melo HOM05D006986 ORTHO05D008714 3.7e-25 119.0 175 46.9
Haze_24406 Corylus avellana HOM05D006986 ORTHO05D008714 4.8e-25 118.6 170 42.4
Potri.009G077700 Populus trichocarpa HOM05D006986 ORTHO05D008714 4.8e-25 118.6 186 40.3
QL01p026443 Quercus lobata HOM05D006986 ORTHO05D008714 4.8e-25 118.6 182 47.3
ClCG03G000370 Citrullus lanatus HOM05D006986 ORTHO05D008714 1.4e-24 117.1 174 46.6
FvH4_3g39700 Fragaria vesca HOM05D006986 ORTHO05D008714 1.4e-24 117.1 179 41.3
FAN16G0899 Fragaria x ananassa HOM05D006986 ORTHO05D008714 1.4e-24 117.1 179 41.3
Manes.18G142700 Manihot esculenta HOM05D006986 ORTHO05D008714 1.4e-24 117.1 181 43.1
Nitab4.5_0000003g0230 Nicotiana tabacum HOM05D006986 ORTHO05D008714 1.4e-24 117.1 160 43.8
FAN11G3553 Fragaria x ananassa HOM05D006986 ORTHO05D008714 2.4e-24 116.3 160 42.5
Medtr3g031370 Medicago truncatula HOM05D006986 ORTHO05D008714 2.4e-24 116.3 169 42.6
Cfa011771 Carpinus fangiana HOM05D006986 ORTHO05D008714 3.1e-24 115.9 173 41.6
TAR636G2132 Trochodendron aralioides HOM05D006986 ORTHO05D008714 4.1e-24 115.5 177 42.9
Atru.chr3.4128 Acer truncatum HOM05D006986 ORTHO05D008714 7.0e-24 114.8 170 42.4
FAN25G2061 Fragaria x ananassa HOM05D006986 ORTHO05D008714 9.1e-24 114.4 159 41.5
DCAR_007347 Daucus carota HOM05D006986 ORTHO05D008714 2.6e-23 112.8 165 43.0
Peaxi162Scf00060g00081 Petunia axillaris HOM05D006986 ORTHO05D008714 2.6e-23 112.8 177 43.5
PGR102G2392 Punica granatum HOM05D006986 ORTHO05D008714 4.5e-23 112.1 185 47.0
Cpa.g.sc2.365 Carica papaya HOM05D006986 ORTHO05D008714 7.7e-23 111.3 166 41.0
Sabra09G0059300 Salix brachista HOM05D006986 ORTHO05D008714 7.7e-23 111.3 177 44.1
TWI79G1150 Tripterygium wilfordii HOM05D006986 ORTHO05D008714 1.7e-22 110.2 177 48.6
CANSAT54G0324 Cannabis sativa HOM05D006986 ORTHO05D008714 2.2e-22 109.8 184 46.7
Gohir.D03G142700 Gossypium hirsutum HOM05D006986 ORTHO05D008714 2.2e-22 109.8 184 45.1
Peaxi162Scf00108g00061 Petunia axillaris HOM05D006986 ORTHO05D008714 5.0e-22 108.6 176 41.5
Peaxi162Scf01176g00011 Petunia axillaris HOM05D006986 ORTHO05D008714 5.0e-22 108.6 177 41.8
Peaxi162Scf00154g00045 Petunia axillaris HOM05D006986 ORTHO05D008714 6.5e-22 108.2 177 41.2
Phvul.006G073400 Phaseolus vulgaris HOM05D006986 ORTHO05D008714 8.5e-22 107.8 167 45.5
VMungo0540G2396 Vigna mungo HOM05D006986 ORTHO05D008714 8.5e-22 107.8 167 45.5
Eucgr.B03999 Eucalyptus grandis HOM05D006986 ORTHO05D008714 1.1e-21 107.5 186 43.0
vmacro14620 Vaccinium macrocarpon HOM05D006986 ORTHO05D008714 1.9e-21 106.7 170 41.8
Ca_15003_v3 Cicer arietinum L. HOM05D006986 ORTHO05D008714 3.2e-21 105.9 176 43.2
Carub.0001s0631 Capsella rubella HOM05D006986 ORTHO05D008714 4.2e-21 105.5 156 42.3
Psat5g153400 Pisum sativum HOM05D006986 ORTHO05D008714 4.2e-21 105.5 169 42.6
THA.LOC104800770 Tarenaya hassleriana HOM05D006986 ORTHO05D008714 7.2e-21 104.8 171 43.3
Rhsim01G0240600 Rhododendron simsii HOM05D006986 ORTHO05D008714 1.2e-20 104.0 152 42.1
SGA_v2.0_scaffold120G32953 Striga asiatica HOM05D006986 ORTHO05D008714 1.6e-20 103.6 160 42.5
Thhalv10008798m.g Eutrema salsugineum HOM05D006986 ORTHO05D008714 2.7e-20 102.8 161 42.2
CDE06G1764 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 3.6e-20 102.4 155 40.6
Glyma.11G164400 Glycine max HOM05D006986 ORTHO05D008714 4.7e-20 102.1 163 46.0
CDE07G1909 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 1.4e-19 100.5 156 38.5
Migut.N00765 Erythranthe guttata HOM05D006986 ORTHO05D008714 1.4e-19 100.5 187 37.4
unitig_60.g25554 Utricularia gibba HOM05D006986 ORTHO05D008714 1.4e-19 100.5 175 38.3
BolC8t47074H Brassica oleracea HOM05D006986 ORTHO05D008714 2.3e-19 99.8 153 48.4
Peaxi162Scf00055g00052 Petunia axillaris HOM05D006986 ORTHO05D008714 2.3e-19 99.8 180 40.6
CDE12G0683 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 3.0e-19 99.4 152 40.1
arahy.Tifrunner.gnm1.ann1.58BUY7 Arachis hypogaea HOM05D006986 ORTHO05D008714 4.0e-19 99.0 179 42.5
BcaB03g13411 Brassica carinata HOM05D006986 ORTHO05D008714 5.2e-19 98.6 156 44.9
A08p35810 Brassica napus HOM05D006986 ORTHO05D008714 8.8e-19 97.8 153 48.4
BraA08t35488Z Brassica rapa HOM05D006986 ORTHO05D008714 8.8e-19 97.8 153 48.4
CARHR006710 Cardamine hirsuta HOM05D006986 ORTHO05D008714 8.8e-19 97.8 156 47.4
arahy.Tifrunner.gnm1.ann1.RI1AQ0 Arachis hypogaea HOM05D006986 ORTHO05D008714 1.2e-18 97.4 179 42.5
C08p02790 Brassica napus HOM05D006986 ORTHO05D008714 1.2e-18 97.4 153 51.0
Glyma.18G057600 Glycine max HOM05D006986 ORTHO05D008714 2.0e-18 96.7 168 45.8
Gorai.003G149800 Gossypium raimondii HOM05D006986 ORTHO05D008714 2.0e-18 96.7 184 43.5
AT1G07020 Arabidopsis thaliana HOM05D006986 ORTHO05D008714 3.4e-18 95.9 156 43.6
SalBow2G1752 Salvia bowleyana HOM05D006986 ORTHO05D008714 4.4e-18 95.5 162 43.8
COL.COLO4_11142 Corchorus olitorius HOM05D006986 ORTHO05D008714 5.7e-18 95.1 69 63.8
Aqoxy1G01299 Aquilegia oxysepala HOM05D006986 ORTHO05D008714 9.8e-18 94.4 180 42.2
MSTRG.12687 Avicennia marina HOM05D006986 ORTHO05D008714 9.8e-18 94.4 179 44.7
MD03G1055700 Malus domestica HOM05D006986 ORTHO05D008714 9.8e-18 94.4 182 35.7
AL1G17080 Arabidopsis lyrata HOM05D006986 ORTHO05D008714 1.3e-17 94.0 153 41.2
Prupe.6G049000 Prunus persica HOM05D006986 ORTHO05D008714 2.2e-17 93.2 182 41.2
ECA240G2743 Erigeron canadensis HOM05D006986 ORTHO05D008714 3.7e-17 92.4 171 42.1
Aa31LG1G8070 Aethionema arabicum HOM05D006986 ORTHO05D008714 4.8e-17 92.0 153 39.9
Peaxi162Scf00222g00001 Petunia axillaris HOM05D006986 ORTHO05D008714 1.1e-16 90.9 165 41.8
TPR.G35622 Trifolium pratense HOM05D006986 ORTHO05D008714 1.1e-16 90.9 100 53.0
HanXRQChr02g0033811 Helianthus annuus HOM05D006986 ORTHO05D008714 1.4e-16 90.5 178 40.4
Sp1g05740 Schrenkiella parvula HOM05D006986 ORTHO05D008714 1.4e-16 90.5 157 41.4
Ciclev10029398m.g Citrus clementina HOM05D006986 ORTHO05D008714 2.4e-16 89.7 179 48.6
Gohir.A03G025800 Gossypium hirsutum HOM05D006986 ORTHO05D008714 3.1e-16 89.4 184 42.4
RcHm_v2.0_Chr5g0071561 Rosa chinensis HOM05D006986 ORTHO05D008714 5.9e-15 85.1 177 37.3
Peaxi162Scf01176g00002 Petunia axillaris HOM05D006986 ORTHO05D008714 1.0e-14 84.3 159 40.3
PSO765G0136 Papaver somniferum HOM05D006986 ORTHO05D008714 3.2e-13 79.3 179 42.5
HPP92_003693 Vanilla planifolia HOM05D006986 ORTHO05D008714 5.5e-13 78.6 169 35.5
Actinidia32614 Actinidia chinensis HOM05D006986 ORTHO05D008714 8.0e-12 74.7 136 43.4
PSO339G5371 Papaver somniferum HOM05D006986 ORTHO05D008714 2.3e-11 73.2 166 40.4
PSO170G2557 Papaver somniferum HOM05D006986 ORTHO05D008714 8.8e-11 71.2 169 35.5
ATR0174G018 Amborella trichopoda HOM05D006986 ORTHO05D008714 1.5e-10 70.5 165 38.2
FvH4_3g21494 Fragaria vesca HOM05D006986 ORTHO05D008714 9.8e-10 67.8 67 47.8
PSO349G0135 Papaver somniferum HOM05D006986 ORTHO05D008714 9.8e-10 67.8 112 37.5
Glyma.06G163400 Glycine max HOM05D006986 ORTHO05D008714 4.5e-07 58.9 46 54.3
SEGI_39902 Sequoiadendron giganteum HOM05D006986 ORTHO05D008714 5.9e-07 58.5 173 29.5


User provided reference genes

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