Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 5.3e-198 694.1 339 100.0
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.8e-193 679.1 339 97.9
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 6.2e-191 670.6 350 94.9
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.4e-161 573.2 387 75.5
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 8.8e-161 570.5 388 76.3
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 1.5e-152 543.1 392 70.4
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 3.4e-144 515.4 390 68.5
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.9e-140 502.3 390 66.4
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 2.5e-139 499.2 390 66.4
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 7.2e-139 497.7 390 66.4
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 7.2e-139 497.7 390 66.4
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 2.3e-137 492.7 391 66.0
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 8.9e-137 490.7 387 65.6
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 9.8e-136 487.3 387 64.9
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.8e-136 487.3 387 64.9
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.2e-135 486.1 393 64.1
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 2.8e-135 485.7 390 63.8
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 6.3e-135 484.6 393 65.1
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 8.3e-135 484.2 391 65.2
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 8.3e-135 484.2 390 63.8
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.8e-134 483.0 388 64.2
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.8e-134 483.0 388 63.9
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.8e-134 483.0 388 63.9
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.4e-134 482.6 388 63.9
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 2.4e-134 482.6 391 65.5
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 3.1e-134 482.3 388 64.9
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 9.2e-134 480.7 391 63.9
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 9.2e-134 480.7 391 65.5
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.6e-133 479.9 390 64.6
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 2.0e-133 479.6 393 63.6
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 3.5e-133 478.8 391 65.2
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 3.5e-133 478.8 393 64.1
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.0e-132 477.2 388 64.4
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 1.0e-132 477.2 390 63.6
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.7e-132 476.5 389 62.5
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 3.8e-132 475.3 409 63.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 3.8e-132 475.3 391 64.2
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 3.8e-132 475.3 393 63.1
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.1e-131 473.8 399 62.7
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.5e-131 473.4 389 62.0
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 1.5e-131 473.4 400 61.5
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 9.5e-131 470.7 398 61.3
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.2e-130 470.3 395 63.5
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 2.1e-130 469.5 400 61.5
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 2.1e-130 469.5 392 64.0
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.8e-130 469.2 398 61.1
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.4e-129 466.8 392 61.5
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 3.0e-129 465.7 388 62.6
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 4.0e-129 465.3 392 62.5
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 5.2e-129 464.9 394 61.4
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.2e-128 463.8 388 63.4
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 2.6e-128 462.6 390 62.1
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.4e-128 462.2 373 62.2
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 3.7e-127 458.8 390 62.3
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 6.4e-127 458.0 390 61.5
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 6.4e-127 458.0 398 60.6
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 4.1e-126 455.3 395 61.0
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 5.4e-126 454.9 365 63.3
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 9.2e-126 454.1 390 61.0
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 9.2e-126 454.1 394 61.4
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 9.2e-126 454.1 394 61.4
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 9.2e-126 454.1 299 72.9
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.6e-125 453.4 390 61.5
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 7.8e-125 451.1 395 60.8
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.0e-124 450.7 368 61.1
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.3e-124 450.3 393 60.3
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.3e-124 450.3 393 58.8
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 2.3e-124 449.5 395 60.8
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 5.0e-124 448.4 350 63.7
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 6.6e-124 448.0 387 60.5
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 6.6e-124 448.0 368 60.6
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 8.6e-124 447.6 437 55.4
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 2.5e-123 446.0 327 67.6
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 2.5e-123 446.0 397 58.9
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.3e-123 445.7 385 61.0
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 6.2e-122 441.4 467 54.0
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 2.6e-120 436.0 390 57.9
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 2.6e-120 436.0 386 59.6
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 4.9e-119 431.8 498 51.0
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 6.4e-119 431.4 397 57.2
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 2.4e-118 429.5 386 59.1
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 4.1e-118 428.7 396 57.8
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 4.1e-118 428.7 370 59.7
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.5e-117 425.6 395 57.0
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 1.5e-115 420.2 338 60.4
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.3e-115 419.1 365 59.5
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 9.5e-115 417.5 431 53.4
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 1.2e-114 417.2 283 71.0
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 6.2e-114 414.8 388 58.0
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 9.2e-110 401.0 388 55.7
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.2e-109 400.6 407 55.3
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.0e-108 397.5 348 62.4
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.7e-108 396.7 296 64.9
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.1e-105 387.5 281 66.9
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.1e-105 386.0 387 55.0
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 1.1e-102 377.5 304 58.6
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.1e-93 346.7 373 50.9
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.1e-93 346.7 253 68.8
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.8e-90 336.3 270 63.0
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.7e-87 327.0 317 49.8
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 8.4e-87 324.7 289 52.2
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 4.8e-82 308.9 380 43.7
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 5.3e-81 305.4 228 64.5
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 1.4e-78 297.4 287 48.1
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 3.7e-74 282.7 190 64.7
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 4.8e-74 282.3 213 63.4
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 4.8e-74 282.3 213 63.4
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 4.8e-74 282.3 213 63.4
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.2e-71 273.5 273 53.8
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 6.5e-71 271.9 213 62.4
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 3.9e-68 262.7 286 41.6
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 5.0e-63 245.7 304 40.5
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 7.9e-61 238.4 285 40.4
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 8.5e-55 218.4 197 57.4
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.2e-53 214.5 275 39.6
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.2e-50 203.8 177 57.1
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.1e-45 187.2 151 61.6
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 4.8e-42 176.0 174 60.3
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 3.5e-40 169.9 89 87.6
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 7.7e-40 168.7 108 70.4
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 7.7e-32 142.1 97 66.0
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.7e-29 132.9 180 46.7
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 5.2e-28 129.4 87 67.8
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.0e-23 115.2 64 81.2
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 8.6e-23 112.1 162 36.4
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 1.8e-20 104.4 58 70.7
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 5.9e-16 89.4 47 83.0
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 5.9e-16 89.4 47 83.0
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 6.4e-10 69.3 41 75.6
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 3.5e-08 63.5 117 40.2


User provided reference genes

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