Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 8.4e-139 497.3 248 100.0
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 5.3e-109 398.3 267 80.1
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.1e-85 320.9 277 66.8
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 7.3e-74 281.6 212 67.5
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 2.8e-73 279.6 194 73.2
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 1.8e-72 276.9 200 70.0
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 1.5e-71 273.9 249 59.8
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 2.6e-71 273.1 214 65.9
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.3e-70 270.8 201 68.2
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.3e-70 270.8 195 70.8
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 2.2e-70 270.0 196 68.4
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 2.2e-70 270.0 194 70.6
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 2.9e-70 269.6 200 68.0
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.7e-70 269.2 193 69.4
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 3.7e-70 269.2 261 57.5
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 4.9e-70 268.9 250 58.4
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.1e-69 267.7 191 71.2
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.4e-69 267.3 196 68.4
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.9e-69 266.9 208 65.4
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 4.1e-69 265.8 194 69.6
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 5.4e-69 265.4 194 69.1
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 7.0e-69 265.0 191 70.7
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 9.2e-69 264.6 204 65.2
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 1.2e-68 264.2 194 69.6
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 1.6e-68 263.8 194 68.6
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 2.0e-68 263.5 194 69.6
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 2.7e-68 263.1 195 68.2
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 4.6e-68 262.3 194 68.0
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 6.0e-68 261.9 211 64.0
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 6.0e-68 261.9 195 68.7
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 7.8e-68 261.5 191 68.1
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.7e-67 260.4 201 64.2
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.7e-67 260.4 193 67.9
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 3.0e-67 259.6 194 68.0
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 3.0e-67 259.6 196 66.3
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 5.0e-67 258.8 193 67.9
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 5.0e-67 258.8 173 72.8
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.0e-67 258.8 193 67.9
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 6.6e-67 258.5 199 64.3
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.5e-66 257.3 252 56.0
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 5.6e-66 255.4 199 66.3
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 5.6e-66 255.4 203 63.5
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 7.3e-66 255.0 198 66.7
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 7.3e-66 255.0 232 59.9
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 7.3e-66 255.0 235 59.1
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 9.5e-66 254.6 236 59.7
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 9.5e-66 254.6 248 56.5
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 1.6e-65 253.8 204 64.7
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 2.1e-65 253.4 260 53.8
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 2.8e-65 253.1 197 62.4
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 6.2e-65 251.9 200 62.0
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 1.1e-64 251.1 210 64.3
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.4e-64 250.8 235 58.3
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 3.1e-64 249.6 197 61.9
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 3.1e-64 249.6 194 66.0
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 4.0e-64 249.2 192 65.1
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 5.2e-64 248.8 186 66.1
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 8.9e-64 248.1 193 63.7
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 1.2e-63 247.7 233 58.4
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.2e-63 247.7 224 60.7
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 2.0e-63 246.9 233 57.9
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 2.0e-63 246.9 263 53.6
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 3.4e-63 246.1 163 73.6
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 4.4e-63 245.7 159 73.6
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 7.5e-63 245.0 226 58.0
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 7.5e-63 245.0 202 60.4
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 9.8e-63 244.6 165 70.3
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 1.7e-62 243.8 197 59.9
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 2.9e-62 243.0 197 61.4
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.9e-62 242.3 175 69.1
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 6.4e-62 241.9 199 60.8
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 6.4e-62 241.9 200 60.5
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.4e-61 240.7 175 68.6
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 1.4e-61 240.7 247 54.3
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 4.1e-61 239.2 200 62.0
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 4.1e-61 239.2 199 59.8
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 4.1e-61 239.2 199 59.8
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 1.6e-60 237.3 216 56.9
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 2.7e-60 236.5 255 54.9
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 3.5e-60 236.1 199 59.3
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 4.6e-60 235.7 233 53.6
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 6.0e-60 235.3 249 53.8
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 7.8e-60 235.0 169 65.1
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 6.6e-59 231.9 232 54.3
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.1e-58 231.1 172 65.1
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 1.9e-58 230.3 206 58.3
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 1.5e-55 220.7 197 58.9
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 8.4e-54 214.9 178 63.5
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 4.6e-52 209.1 248 48.0
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 4.6e-52 209.1 357 42.9
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 1.3e-51 207.6 194 54.6
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 9.6e-50 201.4 139 71.9
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 6.8e-48 195.3 277 43.0
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 8.9e-48 194.9 236 48.3
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 2.9e-46 189.9 168 60.1
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.8e-46 189.5 145 65.5
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 6.4e-46 188.7 244 45.9
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 1.2e-44 184.5 205 53.7
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 3.5e-44 183.0 204 53.4
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 9.6e-42 174.9 127 68.5
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 4.8e-41 172.6 377 34.0
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.1e-40 171.4 201 45.8
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 4.0e-40 169.5 129 65.1
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 1.7e-35 154.1 102 72.5
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 1.8e-32 144.1 123 57.7
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 6.9e-32 142.1 112 64.3
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 9.9e-31 138.3 159 50.3
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 2.7e-28 130.2 167 45.5
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 5.6e-26 122.5 95 63.2
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 2.9e-14 83.6 107 44.9
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.0e-11 75.1 99 46.5
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 1.5e-10 71.2 41 75.6
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 2.2e-06 57.4 29 86.2


User provided reference genes

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