Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 3.7e-116 421.8 246 100.0
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.6e-106 389.0 246 90.7
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 5.5e-88 328.2 247 71.3
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 2.0e-77 293.1 238 62.6
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 7.5e-77 291.2 177 78.5
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 1.3e-76 290.4 246 65.0
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.3e-76 290.4 177 78.5
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.2e-76 289.7 177 79.1
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.2e-76 289.7 177 79.1
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 2.8e-76 289.3 177 78.5
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.8e-76 289.3 177 78.5
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 4.8e-76 288.5 177 78.0
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 4.8e-76 288.5 177 78.0
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 1.1e-75 287.3 252 68.3
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 1.1e-75 287.3 179 77.7
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 1.8e-75 286.6 177 77.4
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 2.4e-75 286.2 247 62.3
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 3.1e-75 285.8 244 59.0
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 4.1e-75 285.4 177 75.7
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 7.0e-75 284.6 244 67.6
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 9.1e-75 284.3 173 77.5
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 9.1e-75 284.3 179 76.0
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 9.1e-75 284.3 247 69.6
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.6e-74 283.5 177 76.3
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 1.6e-74 283.5 242 68.2
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 2.0e-74 283.1 246 65.0
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 2.0e-74 283.1 246 63.8
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 2.0e-74 283.1 247 67.2
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 2.7e-74 282.7 178 77.0
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 5.9e-74 281.6 177 75.7
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 5.9e-74 281.6 177 77.4
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 5.9e-74 281.6 247 67.2
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 1.0e-73 280.8 171 77.8
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 2.9e-73 279.3 171 77.2
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 2.9e-73 279.3 171 77.2
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 3.8e-73 278.9 171 77.8
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 6.5e-73 278.1 245 60.4
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 1.1e-72 277.3 254 61.0
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.1e-72 277.3 173 76.3
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 1.1e-72 277.3 244 68.9
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 1.1e-72 277.3 171 77.2
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 1.5e-72 276.9 251 60.6
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 2.5e-72 276.2 244 61.1
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 3.2e-72 275.8 177 75.7
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.2e-72 275.8 252 63.9
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 7.2e-72 274.6 171 76.6
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.6e-71 273.5 244 57.4
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 2.1e-71 273.1 246 66.3
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 2.1e-71 273.1 175 74.9
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 2.1e-71 273.1 171 76.0
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 6.1e-71 271.6 246 62.2
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 8.0e-71 271.2 172 74.4
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 1.0e-70 270.8 171 75.4
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.8e-70 270.0 244 62.3
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.8e-70 270.0 244 62.3
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 1.8e-70 270.0 171 75.4
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 4.0e-70 268.9 244 65.2
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 5.2e-70 268.5 173 75.1
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 6.8e-70 268.1 171 74.3
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 6.8e-70 268.1 245 60.8
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 8.8e-70 267.7 177 75.7
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 8.8e-70 267.7 177 75.7
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 8.8e-70 267.7 245 62.9
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 8.8e-70 267.7 244 58.6
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 8.8e-70 267.7 244 59.4
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 1.5e-69 266.9 171 74.9
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 1.5e-69 266.9 177 72.9
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 2.0e-69 266.5 251 57.4
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.3e-68 263.8 171 73.7
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.7e-68 263.5 244 59.4
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 2.8e-68 262.7 177 72.9
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 2.8e-68 262.7 249 58.2
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 3.7e-68 262.3 176 70.5
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 3.7e-68 262.3 179 72.6
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.8e-67 260.0 172 72.1
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 2.4e-67 259.6 249 59.4
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 2.4e-67 259.6 249 59.4
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 5.4e-67 258.5 248 60.1
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 9.2e-67 257.7 249 58.6
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 2.0e-66 256.5 249 58.2
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 2.0e-66 256.5 175 70.3
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 1.7e-65 253.4 177 66.7
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.7e-65 253.4 249 66.3
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.7e-65 253.4 249 66.3
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.0e-65 251.9 171 71.3
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 5.0e-65 251.9 173 69.4
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.3e-64 248.1 246 59.3
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 9.5e-64 247.7 172 69.2
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 2.8e-63 246.1 244 62.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 5.2e-62 241.9 241 60.6
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.2e-61 240.7 176 63.6
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.2e-61 240.7 176 63.6
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.5e-61 240.4 226 60.6
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 1.7e-60 236.9 152 74.3
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.7e-60 236.9 246 61.4
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.7e-60 236.9 246 61.4
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.1e-59 234.2 178 63.5
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.1e-59 234.2 171 67.8
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 4.1e-59 232.3 248 55.6
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 5.4e-59 231.9 251 52.6
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 1.6e-58 230.3 171 68.4
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 7.8e-58 228.0 230 57.8
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 3.6e-55 219.2 176 61.9
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 2.3e-54 216.5 140 73.6
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 3.2e-51 206.1 219 57.1
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 7.0e-51 204.9 177 55.4
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 9.2e-51 204.5 133 75.9
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.0e-50 203.4 134 73.9
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 5.1e-41 172.2 126 66.7
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 3.3e-40 169.5 122 65.6
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 4.0e-38 162.5 126 66.7
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.1e-31 140.2 107 67.3
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 1.6e-26 124.0 177 40.7
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.3e-23 114.4 178 36.0
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 8.1e-23 111.7 62 83.9
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 4.8e-15 85.9 171 35.7
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 3.1e-06 56.6 57 50.9
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 4.0e-06 56.2 151 26.5


User provided reference genes

Program Settings