Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 1.9e-68 262.7 166 100.0
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 1.1e-26 124.0 88 77.3
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 2.9e-24 115.9 88 72.7
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 6.7e-21 104.8 89 70.8
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 5.5e-15 85.1 100 52.0
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 9.4e-15 84.3 100 49.0
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 2.7e-14 82.8 92 53.3
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 3.6e-14 82.4 99 52.5
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 4.6e-14 82.0 99 50.5
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 7.9e-14 81.3 96 51.0
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 1.0e-13 80.9 99 47.5
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.1e-13 78.6 103 48.5
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 8.8e-13 77.8 92 52.2
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 8.8e-13 77.8 103 48.5
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.5e-12 77.0 96 46.9
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.5e-12 76.3 100 49.0
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 3.3e-12 75.9 96 52.1
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 4.3e-12 75.5 98 51.0
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 4.3e-12 75.5 96 54.2
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 7.4e-12 74.7 100 50.0
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 2.2e-11 73.2 98 46.9
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 2.2e-11 73.2 99 47.5
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 2.8e-11 72.8 91 51.6
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 2.8e-11 72.8 63 60.3
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 3.7e-11 72.4 95 49.5
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 3.7e-11 72.4 111 42.3
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 8.2e-11 71.2 96 47.9
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 1.8e-10 70.1 93 53.8
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 1.8e-10 70.1 94 48.9
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 2.4e-10 69.7 95 48.4
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 2.4e-10 69.7 96 50.0
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 4.1e-10 68.9 67 61.2
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 4.1e-10 68.9 62 58.1
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 4.1e-10 68.9 90 50.0
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 6.9e-10 68.2 96 49.0
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 6.9e-10 68.2 94 51.1
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 1.2e-09 67.4 95 47.4
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 1.5e-09 67.0 71 52.1
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 1.5e-09 67.0 71 54.9
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.5e-09 67.0 96 47.9
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 1.5e-09 67.0 98 46.9
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 2.0e-09 66.6 95 50.5
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 2.0e-09 66.6 90 45.6
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 4.5e-09 65.5 98 46.9
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 4.5e-09 65.5 96 44.8
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 5.9e-09 65.1 96 51.0
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 7.7e-09 64.7 89 47.2
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 7.7e-09 64.7 96 45.8
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 7.7e-09 64.7 96 45.8
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 7.7e-09 64.7 93 46.2
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 1.0e-08 64.3 90 52.2
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 1.3e-08 63.9 79 49.4
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 1.7e-08 63.5 97 47.4
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 1.7e-08 63.5 117 41.0
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 1.7e-08 63.5 95 45.3
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 1.7e-08 63.5 98 45.9
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 1.7e-08 63.5 123 41.5
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 2.2e-08 63.2 96 47.9
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 3.8e-08 62.4 106 40.6
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 3.8e-08 62.4 106 40.6
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 3.8e-08 62.4 91 47.3
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 3.8e-08 62.4 91 46.2
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 3.8e-08 62.4 98 43.9
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 3.8e-08 62.4 59 59.3
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 5.0e-08 62.0 82 46.3
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 5.0e-08 62.0 82 46.3
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 5.0e-08 62.0 96 45.8
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.0e-08 62.0 54 63.0
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 5.0e-08 62.0 94 44.7
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 6.5e-08 61.6 97 43.3
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 6.5e-08 61.6 96 42.7
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 6.5e-08 61.6 90 50.0
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 6.5e-08 61.6 96 47.9
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 8.5e-08 61.2 101 42.6
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 1.1e-07 60.8 96 45.8
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 1.1e-07 60.8 102 42.2
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 1.1e-07 60.8 70 52.9
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 1.1e-07 60.8 59 55.9
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.4e-07 60.5 51 68.6
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 1.4e-07 60.5 65 55.4
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 1.9e-07 60.1 97 44.3
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 2.5e-07 59.7 100 45.0
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 2.5e-07 59.7 68 51.5
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 4.2e-07 58.9 97 42.3
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 4.2e-07 58.9 97 42.3
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 7.2e-07 58.2 89 44.9
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 7.2e-07 58.2 84 46.4
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 7.2e-07 58.2 54 61.1
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 7.2e-07 58.2 65 47.7
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 1.2e-06 57.4 94 43.6
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 1.2e-06 57.4 92 44.6
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 1.2e-06 57.4 70 51.4
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.6e-06 57.0 96 41.7
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 1.6e-06 57.0 94 44.7
AL7G11290 Arabidopsis lyrata HOM05D006766 ORTHO05D008534 2.1e-06 56.6 65 47.7
arahy.Tifrunner.gnm1.ann1.KI7M62 Arachis hypogaea HOM05D007491 ORTHO05D009489 2.1e-06 56.6 89 43.8
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 2.1e-06 56.6 71 45.1
AT4G39300 Arabidopsis thaliana HOM05D006766 ORTHO05D008534 2.7e-06 56.2 66 47.0
CiPaw.05G064400 Carya illinoinensis HOM05D006766 ORTHO05D008534 2.7e-06 56.2 60 53.3
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 2.7e-06 56.2 56 53.6
vmacro02108 Vaccinium macrocarpon HOM05D006766 ORTHO05D008534 2.7e-06 56.2 88 45.5
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 6.1e-06 55.1 91 46.2


User provided reference genes

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