Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 0.0e+00 2109.7 1098 100.0
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 0.0e+00 1702.6 1193 77.7
AUR62043520 Chenopodium quinoa HOM05D012164 ORTHO05D003767 0.0e+00 1442.2 1156 70.9
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 0.0e+00 1101.3 1216 53.8
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.1e-188 664.8 1204 41.9
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 3.7e-152 543.5 1326 36.0
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 4.4e-137 493.4 1095 36.1
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 4.2e-95 354.0 1207 32.6
Sc09g0009160 Simmondsia chinensis HOM05D012164 ORTHO05D003767 6.8e-45 187.2 1271 26.4
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 1.5e-20 106.3 342 28.9
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 1.3e-19 103.2 333 29.4
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.7e-19 102.8 966 22.6
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 2.3e-16 92.4 445 26.3
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 3.3e-15 88.6 102 42.2
Ah.16g105510 Amaranthus hybridus HOM05D012164 ORTHO05D003767 3.6e-14 85.1 195 37.4
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 6.2e-14 84.3 1074 23.1
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 8.1e-14 84.0 101 40.6
Ah.16g105410 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.1e-13 83.6 96 50.0
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 2.4e-13 82.4 159 35.2
Ah.16g105520 Amaranthus hybridus HOM05D012164 ORTHO05D003767 5.2e-13 81.3 96 49.0
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 8.9e-13 80.5 777 23.2
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 4.4e-12 78.2 63 54.0
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 5.8e-12 77.8 101 38.6
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 5.8e-12 77.8 244 29.9
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 7.6e-12 77.4 99 39.4
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.6e-12 77.4 99 39.4
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.6e-12 77.4 99 38.4
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.6e-12 77.4 99 39.4
Ah.16g105450 Amaranthus hybridus HOM05D012164 ORTHO05D003767 9.9e-12 77.0 225 29.8
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.3e-11 76.6 56 53.6
Sc23g0005170 Simmondsia chinensis HOM05D012164 ORTHO05D003767 1.3e-11 76.6 1111 23.2
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 1.3e-11 76.6 119 38.7
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.7e-11 76.3 102 36.3
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.7e-11 76.3 842 23.3
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 1.7e-11 76.3 101 37.6
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 3.8e-11 75.1 181 32.0
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 3.8e-11 75.1 79 38.0
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 6.4e-11 74.3 337 26.4
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 6.4e-11 74.3 66 48.5
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 8.4e-11 73.9 103 41.7
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 1.1e-10 73.6 121 36.4
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.1e-10 73.6 159 30.2
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.1e-10 73.6 98 37.8
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 1.1e-10 73.6 94 45.7
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 1.4e-10 73.2 75 44.0
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 1.4e-10 73.2 123 35.8
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 1.4e-10 73.2 135 32.6
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 1.4e-10 73.2 135 32.6
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.4e-10 73.2 159 30.8
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.4e-10 73.2 60 60.0
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 1.9e-10 72.8 148 34.5
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 1.9e-10 72.8 107 36.4
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.9e-10 72.8 85 41.2
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 1.9e-10 72.8 95 42.1
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 1.9e-10 72.8 306 23.9
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 3.2e-10 72.0 144 30.6
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 3.2e-10 72.0 121 36.4
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 3.2e-10 72.0 144 30.6
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 3.2e-10 72.0 144 30.6
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 3.2e-10 72.0 99 41.4
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 4.2e-10 71.6 85 41.2
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 5.4e-10 71.2 134 31.3
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 7.1e-10 70.9 85 45.9
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 7.1e-10 70.9 162 29.6
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 7.1e-10 70.9 185 30.3
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 7.1e-10 70.9 96 37.5
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 9.2e-10 70.5 94 42.6
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.2e-09 70.1 57 49.1
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 1.2e-09 70.1 156 31.4
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.2e-09 70.1 252 27.4
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.6e-09 69.7 85 41.2
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 2.1e-09 69.3 61 50.8
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 2.1e-09 69.3 101 40.6
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 2.1e-09 69.3 85 44.7
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 2.7e-09 68.9 1069 23.9
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 2.7e-09 68.9 55 56.4
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 2.7e-09 68.9 125 34.4
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 3.5e-09 68.6 136 33.8
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 6.0e-09 67.8 141 33.3
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 6.0e-09 67.8 101 33.7
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 6.0e-09 67.8 99 41.4
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 7.8e-09 67.4 156 32.7
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 7.8e-09 67.4 115 31.3
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 1.0e-08 67.0 96 40.6
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 1.0e-08 67.0 107 40.2
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.0e-08 67.0 73 45.2
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 1.0e-08 67.0 121 36.4
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 1.0e-08 67.0 88 39.8
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.3e-08 66.6 115 34.8
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 1.3e-08 66.6 58 53.4
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.3e-08 66.6 96 38.5
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 3.9e-08 65.1 73 42.5
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 5.1e-08 64.7 139 31.7
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 5.1e-08 64.7 124 31.5
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 6.6e-08 64.3 133 33.1
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 6.6e-08 64.3 133 33.1
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 8.7e-08 63.9 78 39.7
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 8.7e-08 63.9 133 33.1
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 8.7e-08 63.9 133 33.1
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 8.7e-08 63.9 482 21.8
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 1.1e-07 63.5 133 28.6
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 1.1e-07 63.5 62 46.8
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 1.1e-07 63.5 115 32.2
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 1.5e-07 63.2 133 32.3
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 1.5e-07 63.2 80 37.5
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 1.9e-07 62.8 1096 22.5
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 1.9e-07 62.8 71 45.1
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 4.3e-07 61.6 1016 22.7
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 7.3e-07 60.8 76 40.8
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 9.6e-07 60.5 166 26.5
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 9.6e-07 60.5 76 40.8
VMungo0647G2380 Vigna mungo HOM05D058389 ORTHO05D003767 9.6e-07 60.5 124 31.5
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 1.3e-06 60.1 1035 22.2
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 1.6e-06 59.7 62 45.2
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 2.1e-06 59.3 68 50.0
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 3.6e-06 58.5 771 23.3
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 6.2e-06 57.8 862 22.2
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 6.2e-06 57.8 97 33.0


User provided reference genes

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