Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 7.6e-92 340.5 173 100.0
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 1.5e-63 246.5 130 94.6
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 3.3e-47 192.2 242 50.0
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 2.7e-41 172.6 249 44.6
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 3.6e-33 145.6 285 37.5
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 8.8e-32 141.0 136 52.9
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 7.4e-31 137.9 249 39.0
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 2.2e-30 136.3 253 38.3
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 2.8e-30 136.0 137 56.2
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 2.4e-29 132.9 247 38.1
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 3.1e-29 132.5 208 41.3
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 3.1e-29 132.5 215 40.5
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 1.7e-27 126.7 248 37.9
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 3.8e-27 125.6 247 36.4
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 8.5e-27 124.4 138 47.1
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 2.5e-26 122.9 127 50.4
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 3.2e-26 122.5 127 49.6
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 3.2e-26 122.5 118 55.9
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 5.5e-26 121.7 242 36.4
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 1.2e-25 120.6 132 49.2
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 1.2e-25 120.6 235 36.6
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.6e-25 120.2 139 46.8
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 2.1e-25 119.8 251 32.7
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 3.6e-25 119.0 237 35.0
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 3.6e-25 119.0 126 50.0
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 3.6e-25 119.0 138 48.6
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 3.6e-25 119.0 138 48.6
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 3.6e-25 119.0 242 35.5
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 3.6e-25 119.0 129 51.2
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 4.7e-25 118.6 134 48.5
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 6.1e-25 118.2 137 47.4
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 8.0e-25 117.9 246 35.8
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 8.0e-25 117.9 233 36.5
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 1.4e-24 117.1 138 44.9
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 1.4e-24 117.1 235 36.2
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 1.8e-24 116.7 247 36.0
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 2.3e-24 116.3 118 46.6
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 2.3e-24 116.3 123 48.0
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 3.0e-24 115.9 124 50.0
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 3.0e-24 115.9 124 50.0
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 4.0e-24 115.5 128 48.4
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 4.0e-24 115.5 235 34.9
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 5.2e-24 115.2 247 34.4
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 6.7e-24 114.8 243 35.8
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 6.7e-24 114.8 138 45.7
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 8.8e-24 114.4 138 45.7
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 8.8e-24 114.4 239 34.3
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 1.1e-23 114.0 128 47.7
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 1.1e-23 114.0 237 35.4
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 1.5e-23 113.6 133 45.9
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 2.6e-23 112.8 134 47.0
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 2.6e-23 112.8 125 47.2
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 2.6e-23 112.8 131 47.3
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 3.3e-23 112.5 138 48.6
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 3.3e-23 112.5 135 48.1
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 3.3e-23 112.5 138 48.6
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 3.3e-23 112.5 138 48.6
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 3.3e-23 112.5 125 50.4
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 3.3e-23 112.5 248 35.1
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 3.3e-23 112.5 121 48.8
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 4.4e-23 112.1 256 34.4
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 5.7e-23 111.7 127 49.6
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.7e-23 111.7 248 35.9
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 7.5e-23 111.3 254 34.6
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 7.5e-23 111.3 134 46.3
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 7.5e-23 111.3 133 45.9
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 1.7e-22 110.2 252 31.7
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 1.7e-22 110.2 136 43.4
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 2.2e-22 109.8 242 34.3
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.2e-22 109.8 256 34.4
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.2e-22 109.8 256 34.4
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 2.2e-22 109.8 128 46.9
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 2.2e-22 109.8 140 44.3
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 2.8e-22 109.4 136 43.4
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 3.7e-22 109.0 137 42.3
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 3.7e-22 109.0 141 44.0
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 4.8e-22 108.6 243 32.5
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 6.3e-22 108.2 134 42.5
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 6.3e-22 108.2 139 41.7
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 8.2e-22 107.8 257 34.6
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 8.2e-22 107.8 129 47.3
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 8.2e-22 107.8 256 34.8
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 8.2e-22 107.8 254 33.9
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 1.1e-21 107.5 253 34.0
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.1e-21 107.5 137 43.1
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.1e-21 107.5 240 33.8
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 1.4e-21 107.1 257 34.6
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.4e-21 107.1 252 33.3
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 2.4e-21 106.3 128 47.7
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 2.4e-21 106.3 139 43.2
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 3.1e-21 105.9 130 45.4
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 3.1e-21 105.9 134 48.5
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 4.1e-21 105.5 137 46.7
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 4.1e-21 105.5 247 34.0
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 4.1e-21 105.5 244 32.8
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 5.3e-21 105.1 248 33.5
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.2e-20 104.0 139 42.4
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 1.2e-20 104.0 132 45.5
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.2e-20 104.0 122 44.3
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 1.6e-20 103.6 243 35.0
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 2.0e-20 103.2 135 43.0
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 2.6e-20 102.8 131 45.8
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 3.5e-20 102.4 141 45.4
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 4.5e-20 102.1 130 44.6
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 7.7e-20 101.3 237 31.2
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 1.0e-19 100.9 239 32.2
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 2.2e-19 99.8 242 29.3
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 2.2e-19 99.8 122 45.9
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 2.9e-19 99.4 125 44.0
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 3.8e-19 99.0 252 32.5
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 6.5e-19 98.2 233 30.5
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 8.5e-19 97.8 259 33.2
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 8.5e-19 97.8 128 44.5
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 1.1e-18 97.4 250 28.0
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 1.1e-18 97.4 239 32.2
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 1.5e-18 97.1 144 42.4
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 2.5e-18 96.3 133 40.6
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 3.2e-18 95.9 141 41.1
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 4.2e-18 95.5 124 41.9
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 5.5e-18 95.1 139 43.2
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 1.6e-17 93.6 130 43.1
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 2.1e-17 93.2 133 43.6
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 1.8e-16 90.1 167 34.7
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 5.2e-16 88.6 114 39.5
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 5.2e-16 88.6 57 64.9
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 5.2e-16 88.6 138 39.9
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 6.8e-16 88.2 175 34.3
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.2e-15 87.4 118 41.5
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 2.0e-15 86.7 130 42.3
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.3e-14 84.0 59 62.7
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 3.5e-12 75.9 136 36.8
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 3.8e-11 72.4 53 56.6
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 4.2e-10 68.9 58 55.2
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.6e-09 67.0 166 32.5
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 6.8e-08 61.6 44 61.4
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 9.8e-07 57.8 55 47.3
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 8.3e-06 54.7 46 58.7
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 8.3e-06 54.7 199 31.2


User provided reference genes

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