Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.3e-81 305.1 162 100.0
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 8.1e-64 247.3 134 97.0
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 1.3e-61 240.0 162 79.0
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 2.2e-61 239.2 162 80.2
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 3.2e-52 208.8 164 70.1
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 5.5e-52 208.0 162 68.5
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 7.2e-52 207.6 162 69.1
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 9.3e-52 207.2 164 69.5
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 1.2e-51 206.8 162 71.0
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.6e-51 206.5 162 68.5
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 4.6e-51 204.9 162 67.3
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 7.9e-51 204.1 162 67.9
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 2.3e-50 202.6 162 66.7
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 1.5e-49 199.9 162 66.7
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 1.9e-49 199.5 162 67.9
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.9e-49 199.5 162 69.1
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 2.5e-49 199.1 162 67.3
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 3.3e-49 198.7 162 65.4
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 3.3e-49 198.7 162 68.5
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 3.3e-49 198.7 162 66.7
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 3.3e-49 198.7 163 66.9
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 4.3e-49 198.4 162 66.0
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 5.7e-49 198.0 162 67.3
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 5.7e-49 198.0 162 64.8
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 7.4e-49 197.6 162 65.4
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 7.4e-49 197.6 162 66.7
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 7.4e-49 197.6 162 67.3
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 9.7e-49 197.2 162 67.9
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 1.6e-48 196.4 161 67.1
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 2.2e-48 196.1 162 66.0
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 2.8e-48 195.7 162 66.7
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 8.2e-48 194.1 162 64.2
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 8.2e-48 194.1 162 66.7
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 1.4e-47 193.4 163 66.3
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.4e-47 193.4 162 64.8
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 1.8e-47 193.0 162 67.9
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.8e-47 193.0 162 67.9
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 3.1e-47 192.2 162 63.6
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 4.1e-47 191.8 162 63.6
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 5.3e-47 191.4 162 66.0
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 5.3e-47 191.4 162 66.0
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 6.9e-47 191.0 162 67.3
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.2e-46 190.3 162 66.7
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.5e-46 189.9 163 64.4
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 2.0e-46 189.5 162 64.8
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 2.6e-46 189.1 162 64.8
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 3.4e-46 188.7 162 66.0
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 4.5e-46 188.3 163 63.8
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 1.0e-45 187.2 162 64.8
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.0e-45 187.2 162 67.3
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 1.0e-45 187.2 162 66.0
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 1.3e-45 186.8 162 67.3
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 2.2e-45 186.0 162 63.0
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 6.5e-45 184.5 212 54.7
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 8.5e-45 184.1 162 60.5
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 1.4e-44 183.3 162 60.5
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.9e-44 183.0 162 60.5
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 1.9e-44 183.0 165 64.2
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 4.2e-44 181.8 163 62.0
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.6e-43 179.9 163 60.7
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 2.7e-43 179.1 162 62.3
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 2.7e-43 179.1 137 70.1
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 7.9e-43 177.6 162 61.1
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 1.1e-41 173.7 164 57.9
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.0e-41 172.9 162 62.3
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 2.0e-41 172.9 167 59.3
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 3.3e-41 172.2 162 58.6
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 5.7e-41 171.4 162 57.4
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 5.7e-41 171.4 162 57.4
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 5.7e-41 171.4 162 57.4
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 5.7e-41 171.4 162 57.4
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 5.7e-41 171.4 162 57.4
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 7.4e-41 171.0 162 61.7
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 7.4e-41 171.0 163 58.3
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 9.7e-41 170.6 164 58.5
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 9.7e-41 170.6 162 57.4
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 3.7e-40 168.7 146 64.4
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 4.8e-40 168.3 163 57.1
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 4.8e-40 168.3 162 61.7
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 6.3e-40 167.9 164 56.1
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 1.4e-39 166.8 162 56.2
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 2.4e-39 166.0 162 60.5
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 9.1e-39 164.1 166 56.0
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 2.0e-38 162.9 166 55.4
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 2.0e-38 162.9 164 55.5
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.6e-38 162.5 133 67.7
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 7.7e-38 161.0 161 55.9
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 6.5e-37 157.9 163 56.4
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 1.6e-35 153.3 135 61.5
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 1.6e-35 153.3 164 50.0
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 5.1e-34 148.3 147 53.1
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 1.1e-33 147.1 117 67.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 6.5e-29 131.3 142 49.3
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 8.5e-29 131.0 161 47.2
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.4e-26 123.6 104 61.5
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.4e-26 123.6 104 61.5
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 2.0e-25 119.8 109 60.6
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 2.6e-25 119.4 104 62.5
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 5.3e-23 111.7 81 71.6
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 8.5e-21 104.4 139 42.4
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 1.5e-12 77.0 59 74.6
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 1.4e-10 70.5 136 35.3
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 2.8e-08 62.8 137 32.8


User provided reference genes

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