Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 3.7e-68 261.5 145 100.0
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.0e-58 227.6 142 90.8
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 9.9e-37 157.1 142 68.3
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 3.9e-33 145.2 146 61.0
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 8.1e-31 137.5 142 59.2
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.4e-27 126.7 142 54.9
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 5.5e-27 124.8 105 70.5
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 9.3e-27 124.0 142 55.6
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 2.1e-26 122.9 99 70.7
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.7e-26 122.5 85 80.0
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 6.0e-26 121.3 129 55.0
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 6.0e-26 121.3 144 54.2
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 7.9e-26 120.9 85 78.8
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.3e-25 120.2 125 58.4
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 1.8e-25 119.8 107 62.6
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.8e-25 119.8 111 60.4
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 2.3e-25 119.4 120 62.5
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 2.3e-25 119.4 141 55.3
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 2.3e-25 119.4 117 57.3
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 2.3e-25 119.4 95 71.6
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 3.0e-25 119.0 141 56.0
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 3.0e-25 119.0 141 57.4
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 5.1e-25 118.2 84 77.4
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 6.7e-25 117.9 89 73.0
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 6.7e-25 117.9 130 60.0
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 8.7e-25 117.5 141 56.0
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 8.7e-25 117.5 95 69.5
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.1e-24 117.1 131 57.3
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.1e-24 117.1 101 66.3
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 1.1e-24 117.1 138 56.5
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 1.1e-24 117.1 95 70.5
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 1.1e-24 117.1 99 69.7
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.5e-24 116.7 131 56.5
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 1.5e-24 116.7 123 59.3
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 1.9e-24 116.3 87 74.7
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 2.5e-24 115.9 118 61.0
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.5e-24 115.9 75 84.0
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.5e-24 115.9 75 84.0
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 2.5e-24 115.9 115 59.1
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 3.3e-24 115.5 132 57.6
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 3.3e-24 115.5 127 55.1
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 4.3e-24 115.2 129 56.6
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 5.6e-24 114.8 140 55.7
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 5.6e-24 114.8 106 64.2
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 7.4e-24 114.4 75 84.0
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 7.4e-24 114.4 75 84.0
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 7.4e-24 114.4 130 55.4
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 9.6e-24 114.0 138 53.6
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 9.6e-24 114.0 141 53.2
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.6e-23 113.2 142 52.8
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 1.6e-23 113.2 143 52.4
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.7e-23 112.1 125 56.8
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 3.7e-23 112.1 110 60.0
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 3.7e-23 112.1 140 52.1
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 4.8e-23 111.7 105 62.9
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.2e-23 111.3 125 56.0
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 8.2e-23 110.9 78 71.8
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.1e-22 110.5 75 78.7
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.8e-22 109.8 93 63.4
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.8e-22 109.8 105 60.0
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 1.8e-22 109.8 110 59.1
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 2.4e-22 109.4 117 55.6
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 2.4e-22 109.4 101 62.4
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.4e-22 109.4 143 54.5
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 3.1e-22 109.0 141 50.4
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 4.0e-22 108.6 115 56.5
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 5.3e-22 108.2 129 54.3
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 6.9e-22 107.8 113 57.5
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 6.9e-22 107.8 101 61.4
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 9.0e-22 107.5 133 51.1
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 9.0e-22 107.5 142 50.7
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 1.2e-21 107.1 100 60.0
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.2e-21 107.1 110 55.5
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.2e-21 107.1 138 49.3
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 1.2e-21 107.1 93 61.3
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 1.5e-21 106.7 106 62.3
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.5e-21 106.7 141 50.4
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.4e-21 105.5 144 47.9
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 5.8e-21 104.8 108 58.3
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 7.6e-21 104.4 112 52.7
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.3e-20 103.6 130 52.3
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 1.3e-20 103.6 141 47.5
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 1.3e-20 103.6 111 55.0
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 1.7e-20 103.2 135 47.4
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.7e-20 103.2 131 45.8
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.7e-20 103.2 90 67.8
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 2.2e-20 102.8 98 59.2
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 2.9e-20 102.4 131 45.8
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 2.9e-20 102.4 143 47.6
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.8e-20 102.1 127 53.5
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.8e-20 102.1 108 59.3
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 4.9e-20 101.7 125 47.2
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 6.5e-20 101.3 125 48.8
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 8.4e-20 100.9 139 46.0
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 3.2e-19 99.0 80 65.0
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 4.2e-19 98.6 72 69.4
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 1.2e-18 97.1 63 79.4
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 1.2e-18 97.1 63 79.4
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 2.1e-18 96.3 74 66.2
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 4.6e-18 95.1 137 46.7
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 4.6e-18 95.1 74 66.2
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 6.0e-18 94.7 105 56.2
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 1.0e-17 94.0 131 48.1
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.3e-17 92.8 113 54.9
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 5.1e-17 91.7 131 42.7
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 8.7e-17 90.9 100 53.0
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 2.4e-14 82.8 55 80.0
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 3.1e-14 82.4 52 80.8
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 4.1e-14 82.0 143 41.3
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 4.1e-14 82.0 90 52.2
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 4.1e-14 82.0 106 48.1
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 9.0e-14 80.9 72 58.3
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 7.7e-13 77.8 74 58.1
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 7.7e-13 77.8 99 50.5
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 2.2e-12 76.3 125 42.4
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 5.0e-12 75.1 127 42.5
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 5.0e-12 75.1 53 67.9
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 5.5e-11 71.6 55 65.5
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 5.5e-11 71.6 141 40.4
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 5.5e-11 71.6 99 47.5
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 6.1e-10 68.2 76 50.0
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 6.1e-10 68.2 145 35.9
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 5.1e-09 65.1 64 53.1
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 1.1e-08 63.9 49 63.3
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.5e-08 63.5 95 50.5
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.5e-08 63.5 95 50.5
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.0e-08 63.2 93 51.6
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.0e-08 63.2 93 51.6


User provided reference genes

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