Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.3e-70 269.6 133 100.0
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.1e-69 266.5 133 98.5
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.9e-66 255.8 133 91.0
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 5.1e-56 221.1 117 90.6
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 5.1e-56 221.1 117 90.6
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 6.7e-56 220.7 117 90.6
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.5e-55 219.5 117 89.7
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 1.5e-55 219.5 117 89.7
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 2.0e-55 219.2 133 78.9
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 4.3e-55 218.0 132 78.0
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 4.3e-55 218.0 132 78.0
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 5.7e-55 217.6 117 88.9
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 7.4e-55 217.2 132 80.3
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.7e-54 216.1 118 84.7
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.8e-54 215.3 132 79.5
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 3.7e-54 214.9 116 87.1
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.7e-54 214.9 118 86.4
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 3.7e-54 214.9 116 89.7
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 4.8e-54 214.5 130 76.2
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 4.8e-54 214.5 116 87.9
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 6.3e-54 214.2 132 78.0
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.3e-54 214.2 132 78.8
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 8.2e-54 213.8 120 83.3
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 8.2e-54 213.8 132 77.3
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 8.2e-54 213.8 132 78.0
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 8.2e-54 213.8 132 77.3
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 1.4e-53 213.0 132 77.3
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.4e-53 213.0 132 77.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.8e-53 212.6 132 78.0
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 1.8e-53 212.6 116 87.1
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.8e-53 212.6 132 77.3
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 2.4e-53 212.2 117 86.3
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 3.1e-53 211.8 120 82.5
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.1e-53 211.8 118 83.1
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 3.1e-53 211.8 116 87.1
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.1e-53 211.5 117 84.6
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 5.3e-53 211.1 118 84.7
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 6.9e-53 210.7 117 82.1
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 6.9e-53 210.7 115 85.2
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 9.1e-53 210.3 118 83.1
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 1.2e-52 209.9 117 84.6
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.2e-52 209.9 117 82.1
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 1.2e-52 209.9 132 77.3
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.5e-52 209.5 133 74.4
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.6e-52 208.8 131 75.6
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.6e-52 208.8 117 82.9
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 3.4e-52 208.4 127 76.4
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 4.5e-52 208.0 132 76.5
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.5e-52 208.0 132 76.5
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 4.5e-52 208.0 120 81.7
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 5.9e-52 207.6 118 81.4
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 5.9e-52 207.6 118 81.4
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.9e-52 207.6 129 78.3
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 5.9e-52 207.6 118 82.2
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 5.9e-52 207.6 132 72.0
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 7.7e-52 207.2 132 76.5
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.7e-51 206.1 118 83.9
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 2.2e-51 205.7 118 83.9
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.9e-51 205.3 118 80.5
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 2.9e-51 205.3 132 73.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.9e-51 205.3 120 80.0
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 2.9e-51 205.3 133 70.7
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.8e-51 204.9 130 76.9
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 6.5e-51 204.1 118 79.7
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 6.5e-51 204.1 118 80.5
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 8.5e-51 203.8 118 81.4
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 8.5e-51 203.8 131 74.0
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.1e-50 203.4 129 75.2
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.9e-50 202.6 118 79.7
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.9e-50 202.6 117 81.2
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.9e-50 202.6 118 79.7
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 2.5e-50 202.2 132 72.7
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 2.5e-50 202.2 119 79.8
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 3.2e-50 201.8 118 78.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 4.2e-50 201.4 117 81.2
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.2e-50 201.4 121 76.0
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 5.5e-50 201.1 117 79.5
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 7.2e-50 200.7 132 70.5
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 9.4e-50 200.3 118 80.5
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.2e-49 199.9 117 77.8
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.6e-49 199.5 125 77.6
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.7e-49 198.7 117 79.5
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.7e-49 198.7 116 81.9
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 4.7e-49 198.0 115 80.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 7.9e-49 197.2 116 78.4
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 7.9e-49 197.2 116 78.4
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 7.9e-49 197.2 121 75.2
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 7.9e-49 197.2 121 76.9
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.0e-48 196.8 114 80.7
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.4e-48 196.4 122 75.4
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.8e-48 196.1 116 77.6
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.3e-48 195.7 116 77.6
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 2.3e-48 195.7 116 77.6
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 2.3e-48 195.7 118 77.1
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 2.3e-48 195.7 116 77.6
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 3.0e-48 195.3 116 76.7
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 3.0e-48 195.3 116 76.7
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 3.0e-48 195.3 116 76.7
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 3.9e-48 194.9 118 75.4
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 3.9e-48 194.9 116 76.7
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 3.9e-48 194.9 117 76.1
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 8.8e-48 193.7 116 76.7
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 8.8e-48 193.7 118 76.3
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.1e-47 193.4 132 69.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.0e-47 192.6 116 75.9
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 2.0e-47 192.6 116 75.9
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.2e-46 189.1 119 73.9
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 4.8e-46 188.0 125 75.2
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 4.8e-46 188.0 118 77.1
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 5.3e-45 184.5 115 73.9
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.5e-44 183.0 110 75.5
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 1.1e-42 176.8 116 71.6
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 4.2e-42 174.9 107 75.7
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.0e-41 170.6 118 66.1
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.0e-40 168.7 110 70.9
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 1.5e-39 166.4 115 67.8
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 5.7e-39 164.5 116 63.8
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 2.9e-35 152.1 110 62.7
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 5.5e-34 147.9 106 60.4
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 8.8e-32 140.6 108 57.4
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 8.8e-32 140.6 107 57.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 3.7e-30 135.2 118 58.5
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 4.1e-21 105.1 59 79.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 4.1e-21 105.1 59 79.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.5e-18 94.7 122 47.5
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 8.9e-16 87.4 57 73.7
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 6.3e-14 81.3 52 75.0
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 7.8e-12 74.3 53 69.8
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 5.0e-11 71.6 54 64.8


User provided reference genes

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