Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008743 Chenopodium quinoa HOM05D007766 ORTHO05D009733 2.9e-91 338.6 175 100.0
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 6.6e-35 151.4 198 47.0
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 9.2e-29 131.0 172 49.4
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 4.6e-12 75.5 139 38.1
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 1.1e-10 70.9 155 35.5
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 1.5e-10 70.5 147 37.4
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 2.5e-10 69.7 106 43.4
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 4.3e-10 68.9 147 36.7
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 5.6e-10 68.6 111 38.7
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 7.3e-10 68.2 118 39.0
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 1.2e-09 67.4 147 36.1
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 2.8e-09 66.2 143 35.7
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 2.8e-09 66.2 107 43.0
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 2.8e-09 66.2 108 43.5
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 3.6e-09 65.9 141 36.2
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 4.7e-09 65.5 132 38.6
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 8.1e-09 64.7 128 35.2
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 8.1e-09 64.7 141 35.5
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 8.1e-09 64.7 147 37.4
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 1.4e-08 63.9 141 35.5
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 1.4e-08 63.9 141 35.5
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 1.8e-08 63.5 108 42.6
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 1.8e-08 63.5 130 40.0
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 2.4e-08 63.2 102 46.1
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 3.1e-08 62.8 132 36.4
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 3.1e-08 62.8 101 41.6
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 4.0e-08 62.4 102 39.2
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 6.8e-08 61.6 127 35.4
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 1.2e-07 60.8 100 38.0
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 1.5e-07 60.5 128 39.8
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 2.6e-07 59.7 129 36.4
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 3.4e-07 59.3 144 33.3
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 3.4e-07 59.3 86 46.5
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 3.4e-07 59.3 136 36.8
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 4.4e-07 58.9 90 41.1
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 5.8e-07 58.5 102 44.1
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 7.6e-07 58.2 143 37.8
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 9.9e-07 57.8 137 33.6
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 1.7e-06 57.0 133 36.8
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 1.7e-06 57.0 145 31.7
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 1.7e-06 57.0 128 40.6
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 3.8e-06 55.8 154 37.0
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 3.8e-06 55.8 130 36.9
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 4.9e-06 55.5 123 37.4
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 4.9e-06 55.5 172 32.6
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 6.4e-06 55.1 133 32.3
Sc17g0002980 Simmondsia chinensis HOM05D007766 ORTHO05D009733 8.4e-06 54.7 50 64.0


User provided reference genes

Program Settings