Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 5.5e-64 247.7 142 100.0
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.2e-55 219.9 142 87.3
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 4.1e-51 204.9 150 77.3
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 1.6e-47 193.0 151 72.8
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 4.1e-43 178.3 158 68.4
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.7e-39 164.9 150 62.7
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.7e-39 164.9 150 62.7
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 2.3e-38 162.5 150 62.7
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 3.9e-38 161.8 152 62.5
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 3.9e-38 161.8 152 62.5
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 5.2e-38 161.4 152 61.2
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 5.2e-38 161.4 150 64.0
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.5e-37 159.8 131 67.9
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 2.0e-37 159.5 150 61.3
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.6e-37 159.1 131 67.9
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 4.4e-37 158.3 150 61.3
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 5.7e-37 157.9 131 67.2
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 5.7e-37 157.9 150 61.3
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 7.4e-37 157.5 131 67.2
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 7.4e-37 157.5 131 67.2
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 9.7e-37 157.1 150 60.7
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 1.7e-36 156.4 150 60.7
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.7e-36 156.4 142 62.7
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 1.7e-36 156.4 152 60.5
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 2.2e-36 156.0 119 71.4
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 2.2e-36 156.0 153 59.5
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 2.2e-36 156.0 152 59.9
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 2.2e-36 156.0 119 68.9
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 2.8e-36 155.6 151 61.6
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 2.8e-36 155.6 151 61.6
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 2.8e-36 155.6 150 59.3
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 4.8e-36 154.8 119 68.9
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 4.8e-36 154.8 119 70.6
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 4.8e-36 154.8 150 59.3
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 6.3e-36 154.5 119 71.4
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 1.1e-35 153.7 150 60.0
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.1e-35 153.7 122 67.2
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 1.4e-35 153.3 152 59.2
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 1.4e-35 153.3 131 65.6
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 1.8e-35 152.9 122 66.4
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 1.8e-35 152.9 150 58.7
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 1.8e-35 152.9 145 57.9
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 1.8e-35 152.9 150 62.0
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 3.1e-35 152.1 155 58.1
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 3.1e-35 152.1 150 62.7
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 3.1e-35 152.1 122 68.0
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 4.1e-35 151.8 152 57.9
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 4.1e-35 151.8 122 67.2
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 4.1e-35 151.8 118 70.3
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 5.3e-35 151.4 150 59.3
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 5.3e-35 151.4 150 59.3
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 5.3e-35 151.4 150 58.7
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 5.3e-35 151.4 150 61.3
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 7.0e-35 151.0 122 68.0
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 9.1e-35 150.6 122 65.6
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 1.2e-34 150.2 110 74.5
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 1.6e-34 149.8 150 59.3
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.6e-34 149.8 122 65.6
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.6e-34 149.8 136 61.8
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 1.6e-34 149.8 136 61.8
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 2.0e-34 149.4 150 58.0
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 2.0e-34 149.4 150 58.0
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 2.0e-34 149.4 152 60.5
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 2.0e-34 149.4 118 67.8
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 2.0e-34 149.4 150 60.7
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 2.6e-34 149.1 150 58.7
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 2.6e-34 149.1 152 57.9
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 3.5e-34 148.7 122 64.8
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 4.5e-34 148.3 152 57.2
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 4.5e-34 148.3 152 57.2
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 7.7e-34 147.5 135 63.0
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 7.7e-34 147.5 116 68.1
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 7.7e-34 147.5 143 57.3
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 1.0e-33 147.1 151 58.9
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 1.0e-33 147.1 150 58.0
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 1.3e-33 146.7 160 55.6
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.3e-33 146.7 152 57.2
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 2.9e-33 145.6 152 56.6
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.9e-33 145.6 150 59.3
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 2.9e-33 145.6 149 60.4
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 2.9e-33 145.6 142 63.4
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 3.8e-33 145.2 136 60.3
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 5.0e-33 144.8 136 60.3
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 8.5e-33 144.1 118 66.9
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.1e-32 143.7 122 63.9
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.5e-32 143.3 119 63.9
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 1.5e-32 143.3 146 56.8
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 1.9e-32 142.9 154 55.8
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 3.2e-32 142.1 150 57.3
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 3.2e-32 142.1 152 55.9
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 3.2e-32 142.1 119 66.4
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 5.5e-32 141.4 150 56.7
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 5.5e-32 141.4 150 58.0
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 7.2e-32 141.0 149 55.7
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 1.2e-31 140.2 119 64.7
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.6e-31 139.8 119 66.4
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 8.0e-31 137.5 147 56.5
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.0e-29 132.9 149 54.4
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 5.7e-29 131.3 156 52.6
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 9.7e-29 130.6 122 57.4
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 9.7e-29 130.6 118 64.4
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 5.3e-27 124.8 83 78.3
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 3.8e-25 118.6 84 72.6
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 2.5e-24 115.9 141 54.6
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 1.6e-23 113.2 97 63.9
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 2.1e-23 112.8 119 58.8
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 2.7e-23 112.5 147 48.3
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 4.7e-23 111.7 118 54.2
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 1.8e-22 109.8 119 59.7
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 1.8e-22 109.8 119 59.7
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 3.0e-22 109.0 119 58.8
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 4.0e-22 108.6 94 64.9
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 5.2e-22 108.2 119 58.8
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 5.2e-22 108.2 119 58.8
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 6.8e-22 107.8 156 48.7
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 8.8e-22 107.5 119 58.8
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 1.5e-21 106.7 83 69.9
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 2.0e-21 106.3 117 51.3
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 4.4e-21 105.1 119 58.8
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 5.7e-21 104.8 77 74.0
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 9.8e-21 104.0 83 67.5
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 2.8e-20 102.4 177 40.1
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 1.4e-19 100.1 77 70.1
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 7.0e-19 97.8 117 48.7
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 5.9e-18 94.7 73 68.5
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 1.5e-16 90.1 99 57.6
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 5.5e-16 88.2 73 64.4
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 1.8e-14 83.2 140 40.0
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 3.4e-13 79.0 111 45.0
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 1.3e-12 77.0 114 43.0
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 2.4e-11 72.8 83 50.6
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 5.4e-11 71.6 85 56.5


User provided reference genes

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