Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.5e-48 194.5 91 100.0
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.1e-44 183.0 94 92.6
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.4e-44 181.8 94 91.5
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 4.3e-38 161.0 97 79.4
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 1.3e-34 149.4 88 78.4
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 8.4e-34 146.7 86 79.1
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 1.1e-33 146.4 99 72.7
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 1.4e-33 146.0 87 79.3
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.9e-33 145.6 84 79.8
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 1.9e-33 145.6 84 79.8
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 4.2e-33 144.4 86 77.9
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 4.2e-33 144.4 86 77.9
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 4.2e-33 144.4 84 78.6
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 7.1e-33 143.7 84 77.4
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 7.1e-33 143.7 87 75.9
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 9.3e-33 143.3 86 77.9
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.2e-32 142.9 87 74.7
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 1.2e-32 142.9 86 77.9
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 1.2e-32 142.9 86 79.1
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 1.6e-32 142.5 87 77.0
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 2.1e-32 142.1 94 72.3
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 2.7e-32 141.7 87 75.9
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 2.7e-32 141.7 83 78.3
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 2.7e-32 141.7 83 78.3
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 2.7e-32 141.7 83 78.3
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 2.7e-32 141.7 86 77.9
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 2.7e-32 141.7 87 77.0
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 2.7e-32 141.7 87 77.0
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 3.5e-32 141.4 87 77.0
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 4.6e-32 141.0 87 77.0
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 6.0e-32 140.6 86 76.7
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 1.0e-31 139.8 87 75.9
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 1.0e-31 139.8 87 75.9
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.0e-31 139.8 87 75.9
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.0e-31 139.8 86 76.7
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 1.3e-31 139.4 86 74.4
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 1.8e-31 139.0 87 75.9
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 1.8e-31 139.0 86 75.6
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.0e-31 138.3 86 74.4
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.0e-31 138.3 87 74.7
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 3.0e-31 138.3 87 75.9
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 3.0e-31 138.3 87 75.9
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 3.0e-31 138.3 87 74.7
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 5.1e-31 137.5 84 75.0
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-31 137.1 82 76.8
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-31 137.1 82 76.8
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-31 137.1 82 76.8
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-31 137.1 82 76.8
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 6.7e-31 137.1 89 76.4
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 6.7e-31 137.1 87 74.7
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 8.7e-31 136.7 82 78.0
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 8.7e-31 136.7 84 75.0
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 8.7e-31 136.7 84 75.0
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 1.1e-30 136.3 96 70.8
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 1.5e-30 136.0 86 75.6
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.5e-30 136.0 87 74.7
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 1.5e-30 136.0 85 75.3
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 1.5e-30 136.0 86 75.6
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 1.5e-30 136.0 87 73.6
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.9e-30 135.6 89 76.4
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 1.9e-30 135.6 83 78.3
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 1.9e-30 135.6 83 78.3
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 3.3e-30 134.8 85 74.1
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 3.3e-30 134.8 85 72.9
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 5.6e-30 134.0 87 72.4
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 9.6e-30 133.3 86 75.6
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 9.6e-30 133.3 87 74.7
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 9.6e-30 133.3 87 75.9
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 9.6e-30 133.3 87 75.9
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 9.6e-30 133.3 87 75.9
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 9.6e-30 133.3 81 75.3
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 1.3e-29 132.9 86 75.6
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 1.3e-29 132.9 86 75.6
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.3e-29 132.9 86 75.6
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 2.1e-29 132.1 89 73.0
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 2.1e-29 132.1 87 73.6
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 2.1e-29 132.1 87 73.6
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 2.8e-29 131.7 87 74.7
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 2.8e-29 131.7 87 74.7
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 2.8e-29 131.7 86 74.4
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 2.8e-29 131.7 87 74.7
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 2.8e-29 131.7 86 74.4
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 2.8e-29 131.7 86 74.4
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 2.8e-29 131.7 87 74.7
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 3.7e-29 131.3 87 72.4
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 6.2e-29 130.6 76 76.3
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 8.2e-29 130.2 87 73.6
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 8.2e-29 130.2 86 73.3
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 1.8e-28 129.0 85 70.6
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 3.1e-28 128.3 87 71.3
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 1.5e-27 125.9 82 74.4
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 1.5e-27 125.9 83 69.9
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 2.6e-27 125.2 86 68.6
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 3.4e-27 124.8 80 72.5
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.0e-26 123.2 79 69.6
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 1.3e-26 122.9 104 59.6
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.8e-23 112.5 86 65.1
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 1.3e-21 106.3 63 76.2
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 2.8e-21 105.1 63 77.8
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 6.3e-21 104.0 75 66.7
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.8e-20 102.4 50 88.0
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 4.1e-20 101.3 50 88.0
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 7.6e-19 97.1 63 71.4
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 1.0e-18 96.7 59 72.9
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.2e-18 95.5 63 73.0
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 9.7e-14 80.1 46 71.7
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 2.8e-13 78.6 56 58.9
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 5.0e-10 67.8 58 55.2
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.4e-06 54.7 39 69.2
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 7.4e-06 53.9 39 66.7


User provided reference genes

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