Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.5e-209 732.6 374 100.0
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 5.8e-190 667.5 374 92.5
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 6.3e-176 620.9 374 84.0
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 1.4e-156 556.6 491 62.3
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 4.7e-139 498.4 373 69.4
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 6.8e-138 494.6 359 70.5
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 8.8e-138 494.2 359 68.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 1.2e-137 493.8 359 68.8
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 7.5e-137 491.1 373 68.1
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 7.5e-137 491.1 373 68.1
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 6.3e-136 488.0 332 71.4
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.8e-135 486.5 371 67.1
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 3.1e-135 485.7 360 67.5
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.6e-134 483.4 359 67.7
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 2.0e-134 483.0 329 72.9
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.0e-134 483.0 373 68.4
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.7e-134 482.6 373 66.5
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 3.5e-134 482.3 373 66.0
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 4.5e-134 481.9 359 67.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 5.9e-134 481.5 359 67.1
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 1.0e-133 480.7 373 67.0
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.0e-133 480.7 331 70.7
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.3e-133 480.3 345 69.9
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.3e-133 480.3 375 66.4
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 6.6e-133 478.0 383 64.5
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 6.6e-133 478.0 383 64.2
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 8.6e-133 477.6 345 69.6
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.1e-132 477.2 363 67.8
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 1.1e-132 477.2 359 66.6
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 3.3e-132 475.7 349 67.9
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 3.3e-132 475.7 354 66.9
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 5.5e-132 474.9 370 64.1
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 5.5e-132 474.9 355 67.9
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 7.2e-132 474.6 335 69.6
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 1.4e-130 470.3 305 74.4
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.8e-130 469.9 351 68.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 2.3e-130 469.5 357 67.8
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 2.3e-130 469.5 329 71.1
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 3.0e-130 469.2 335 68.7
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.2e-130 468.4 373 64.6
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 8.9e-130 467.6 373 64.3
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 8.9e-130 467.6 326 69.9
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.5e-129 466.8 357 67.2
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.0e-129 466.5 357 66.1
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.6e-129 466.1 360 66.9
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 4.4e-129 465.3 348 66.1
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 2.2e-128 463.0 362 65.5
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.1e-127 460.7 372 64.2
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 1.8e-127 459.9 377 64.5
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 2.4e-127 459.5 365 64.4
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 5.4e-127 458.4 372 63.7
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.2e-126 457.2 318 73.3
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.2e-126 457.2 314 73.2
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.6e-126 456.8 340 66.5
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 2.0e-126 456.4 370 65.4
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 2.7e-126 456.1 326 65.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 1.0e-125 454.1 336 68.5
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.0e-125 454.1 355 65.1
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.0e-125 454.1 324 69.1
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 2.3e-125 453.0 329 67.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 3.8e-125 452.2 372 62.6
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 3.8e-125 452.2 348 65.5
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.8e-125 452.2 357 63.6
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.9e-124 449.9 372 62.6
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.5e-124 449.5 397 61.0
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 3.3e-124 449.1 325 66.2
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 4.3e-124 448.7 369 64.5
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 7.3e-124 448.0 329 66.3
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 9.5e-124 447.6 340 65.0
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 9.5e-124 447.6 340 65.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 1.2e-123 447.2 348 65.5
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 2.1e-123 446.4 340 65.0
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.1e-123 446.4 306 69.6
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.8e-123 446.0 340 64.4
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.8e-123 446.0 314 71.7
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 2.8e-123 446.0 366 63.4
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 4.7e-123 445.3 357 63.6
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 4.0e-122 442.2 365 63.6
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 4.4e-121 438.7 364 62.9
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 2.9e-120 436.0 363 60.6
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 1.1e-119 434.1 296 72.0
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.4e-119 433.7 280 74.6
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.9e-119 433.3 354 62.7
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 4.1e-119 432.2 374 61.2
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 4.1e-119 432.2 354 63.6
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 2.7e-118 429.5 328 61.9
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 6.0e-118 428.3 381 59.8
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 6.0e-118 428.3 308 67.9
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.9e-114 414.5 278 74.8
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 2.6e-113 412.9 275 72.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.9e-95 353.6 314 56.7
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.9e-95 353.6 314 56.7
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 4.6e-94 349.0 249 68.7
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.9e-93 345.9 270 63.3
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 3.6e-91 339.3 336 52.4
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.5e-89 334.0 202 82.7
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.9e-88 329.7 229 71.6
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 4.3e-84 315.8 279 55.6
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 9.6e-84 314.7 245 64.1
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.7e-78 296.6 248 59.7
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 8.2e-51 205.3 183 55.2
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 7.4e-36 155.6 153 54.2
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.4e-34 151.4 185 42.2
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.6e-33 147.9 167 47.9
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 4.5e-33 146.4 125 64.0
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 1.6e-25 121.3 147 46.3
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.3e-24 118.2 84 71.4
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-24 118.2 117 51.3
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 9.4e-23 112.1 111 45.9
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 8.3e-19 99.0 132 43.9
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 2.3e-16 90.9 84 57.1
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 2.8e-06 57.4 49 59.2
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 8.0e-06 55.8 48 58.3
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 8.0e-06 55.8 48 58.3


User provided reference genes

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