Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.1e-133 479.9 242 100.0
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 1.3e-89 333.6 264 68.6
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.1e-80 303.9 214 71.5
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 2.4e-80 302.8 185 80.5
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 2.1e-79 299.7 241 64.3
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 3.5e-79 298.9 250 62.8
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 7.9e-79 297.7 189 78.3
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.0e-78 297.4 225 68.4
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 3.9e-78 295.4 188 75.5
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 2.5e-77 292.7 232 66.8
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 3.3e-77 292.4 187 74.3
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 9.6e-77 290.8 188 76.1
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 1.3e-76 290.4 196 73.5
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.3e-76 290.4 176 77.8
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 1.6e-76 290.0 188 76.1
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.1e-76 289.7 176 78.4
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 4.8e-76 288.5 192 72.9
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 8.1e-76 287.7 195 70.8
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.1e-75 287.3 145 98.6
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 1.1e-75 287.3 187 72.2
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.8e-75 286.6 245 60.8
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.8e-75 286.6 229 65.1
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 4.0e-75 285.4 226 63.7
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 5.3e-75 285.0 242 63.2
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.9e-75 284.6 192 72.9
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.2e-74 283.9 187 72.7
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.5e-74 283.5 188 73.9
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 2.0e-74 283.1 230 62.6
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 2.6e-74 282.7 236 61.9
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.6e-74 282.7 188 73.4
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 3.4e-74 282.3 186 73.7
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 4.5e-74 282.0 197 70.6
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 9.9e-74 280.8 187 73.3
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 2.2e-73 279.6 226 63.3
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.8e-73 278.9 192 71.4
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 4.9e-73 278.5 177 78.5
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.9e-73 278.5 192 71.4
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 8.4e-73 277.7 229 62.9
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.4e-72 276.9 226 62.8
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.1e-71 273.1 190 72.6
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 2.7e-71 272.7 177 72.9
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 3.5e-71 272.3 229 61.1
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 3.5e-71 272.3 189 72.5
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 4.6e-71 271.9 235 61.3
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 7.9e-71 271.2 176 77.3
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 1.3e-70 270.4 190 71.6
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.3e-70 270.4 188 69.1
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 1.8e-70 270.0 176 76.7
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 1.8e-70 270.0 234 63.7
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 5.1e-70 268.5 229 61.6
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.1e-69 267.3 188 72.3
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 1.1e-69 267.3 187 69.5
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.3e-69 265.8 198 63.6
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 7.4e-69 264.6 177 69.5
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 9.6e-69 264.2 187 65.2
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 9.6e-69 264.2 214 60.7
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 1.3e-68 263.8 215 61.9
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.1e-68 263.1 192 65.1
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 2.1e-68 263.1 162 75.9
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 2.8e-68 262.7 171 73.1
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 3.7e-68 262.3 192 65.1
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 4.8e-68 261.9 228 61.8
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 4.8e-68 261.9 182 68.1
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.4e-67 260.4 177 69.5
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 3.1e-67 259.2 198 61.6
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 4.0e-67 258.8 192 64.6
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 4.0e-67 258.8 187 69.0
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 6.9e-67 258.1 230 57.8
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 6.9e-67 258.1 231 56.7
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.2e-66 257.3 194 63.9
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.2e-66 257.3 177 70.1
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.5e-66 256.9 166 73.5
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 2.0e-66 256.5 190 63.7
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 2.0e-66 256.5 181 67.4
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 2.6e-66 256.1 211 59.2
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 2.6e-66 256.1 211 59.2
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.6e-66 256.1 184 63.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 3.4e-66 255.8 211 59.7
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 3.4e-66 255.8 194 63.4
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 4.5e-66 255.4 186 64.0
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 5.8e-66 255.0 194 63.4
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 5.8e-66 255.0 194 63.4
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.0e-65 254.2 231 54.1
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-65 253.8 239 54.8
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 1.3e-65 253.8 239 54.8
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.7e-65 253.4 211 58.8
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.7e-65 253.4 239 54.0
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 1.7e-65 253.4 186 65.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 2.9e-65 252.7 183 66.7
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 3.8e-65 252.3 169 72.8
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 4.9e-65 251.9 192 66.1
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.4e-64 250.4 191 61.8
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.9e-64 250.0 177 66.7
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 9.3e-64 247.7 188 63.8
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 1.2e-63 247.3 203 59.1
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 1.0e-62 244.2 177 65.5
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.8e-62 243.4 171 66.7
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 6.7e-62 241.5 227 54.6
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 6.7e-62 241.5 226 56.2
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.9e-61 240.0 198 59.1
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-60 237.3 227 53.3
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.4e-59 233.8 174 63.2
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.4e-59 233.8 154 73.4
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 2.0e-58 229.9 216 57.4
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 2.6e-58 229.6 210 60.0
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 2.6e-58 229.6 155 74.8
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 7.6e-58 228.0 204 56.9
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 7.9e-55 218.0 188 55.9
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 6.3e-52 208.4 130 76.9
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.1e-51 207.6 177 58.8
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 4.1e-51 205.7 138 71.0
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 2.6e-50 203.0 176 59.1
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 6.5e-49 198.4 137 73.0
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 2.1e-47 193.4 128 75.0
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.1e-45 187.6 138 63.8
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 7.4e-45 184.9 155 53.5
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 1.7e-44 183.7 192 50.0
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 2.8e-44 183.0 144 61.1
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 2.4e-43 179.9 148 57.4
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 2.6e-42 176.4 144 58.3
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 4.5e-42 175.6 180 50.6
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 3.9e-38 162.5 95 80.0
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 5.7e-37 158.7 179 52.5
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.7e-36 157.1 196 48.0
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 1.0e-33 147.9 82 84.1
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 1.1e-27 127.9 88 71.6
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 5.3e-27 125.6 77 76.6
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.2e-23 114.4 138 51.4
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.4e-19 100.9 119 47.9
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 4.2e-16 89.4 152 33.6
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 2.6e-13 80.1 50 74.0
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 2.0e-10 70.5 129 29.5
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 3.3e-08 63.2 57 52.6


User provided reference genes

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