Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 7.0e-135 484.6 374 100.0
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.2e-94 350.9 344 74.4
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 1.1e-87 327.8 399 71.7
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 1.1e-74 284.6 402 68.9
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.0e-61 241.5 393 53.7
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 9.7e-60 235.0 393 53.2
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.6e-59 234.2 394 59.4
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 8.2e-59 231.9 391 52.9
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.4e-58 231.1 390 67.4
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 1.4e-58 231.1 387 55.0
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.1e-58 229.9 392 54.6
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 3.1e-58 229.9 391 57.0
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 9.0e-58 228.4 397 52.6
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 2.0e-57 227.3 390 50.8
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 3.4e-57 226.5 391 51.2
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 4.5e-57 226.1 402 57.0
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 4.5e-57 226.1 392 62.0
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 5.9e-57 225.7 390 41.3
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.2e-56 223.8 390 56.7
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.1e-55 221.5 392 54.1
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 1.1e-55 221.5 391 55.5
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.2e-55 219.5 391 61.4
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 5.5e-55 219.2 392 54.6
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 9.4e-55 218.4 390 62.6
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.1e-54 217.2 392 56.4
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.1e-54 217.2 392 56.4
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 1.4e-53 214.5 399 52.9
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 3.0e-53 213.4 408 54.2
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 3.0e-53 213.4 390 55.6
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.9e-53 213.0 392 39.8
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 3.9e-53 213.0 400 58.8
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 3.3e-52 209.9 394 59.4
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 7.4e-52 208.8 390 47.7
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 7.4e-52 208.8 389 55.5
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 7.4e-52 208.8 397 60.2
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.3e-51 208.0 390 55.1
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.7e-51 207.6 391 57.5
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 1.7e-51 207.6 392 57.1
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 2.2e-51 207.2 393 51.9
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 2.8e-51 206.8 399 57.1
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.7e-51 206.5 391 53.5
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 4.8e-51 206.1 397 50.4
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 1.1e-50 204.9 411 60.8
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 1.8e-50 204.1 394 54.3
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 4.1e-50 203.0 392 48.7
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 5.9e-49 199.1 401 41.1
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 5.9e-49 199.1 396 46.5
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.7e-48 197.6 391 49.1
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.7e-48 197.6 393 54.7
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 2.2e-48 197.2 393 48.1
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 3.8e-48 196.4 398 57.3
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 5.0e-48 196.1 391 47.8
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 5.0e-48 196.1 389 53.2
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 8.5e-48 195.3 402 51.0
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.4e-47 194.5 395 50.1
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 1.9e-47 194.1 397 52.6
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 2.5e-47 193.7 391 55.2
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 3.2e-47 193.4 398 51.3
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.2e-47 193.0 389 55.8
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 7.2e-47 192.2 400 57.2
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.2e-46 191.4 391 55.5
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 2.7e-46 190.3 401 45.4
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 2.7e-46 190.3 391 57.0
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 3.6e-46 189.9 395 44.6
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 4.7e-46 189.5 398 43.0
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.0e-45 188.3 404 42.1
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 1.8e-45 187.6 394 44.4
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 1.8e-45 187.6 397 44.1
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 2.3e-45 187.2 396 44.9
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.5e-44 184.5 398 47.0
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.3e-44 183.3 390 45.6
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 4.4e-44 183.0 396 46.2
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 4.4e-44 183.0 389 46.5
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.3e-43 181.4 402 52.7
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 2.2e-43 180.6 395 46.1
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 4.8e-43 179.5 406 38.9
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 4.8e-43 179.5 406 38.9
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 4.8e-43 179.5 396 44.4
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 6.3e-43 179.1 394 35.8
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 8.2e-43 178.7 391 38.4
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 8.2e-43 178.7 302 66.9
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 9.1e-42 175.3 394 35.5
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.5e-41 174.5 402 45.5
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 8.5e-40 168.7 173 55.5
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 4.2e-39 166.4 399 47.4
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 9.4e-39 165.2 390 40.0
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.1e-38 164.1 395 45.1
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 2.7e-38 163.7 399 46.6
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.5e-36 157.9 395 37.5
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 5.7e-36 156.0 301 61.8
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.1e-34 151.8 400 48.5
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 7.7e-33 145.6 146 57.5
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 2.9e-32 143.7 342 47.1
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 2.9e-32 143.7 156 53.8
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.6e-30 137.9 108 62.0
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 4.7e-30 136.3 167 48.5
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 2.3e-29 134.0 151 49.0
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 7.5e-28 129.0 362 39.0
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.4e-26 124.8 498 40.2
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 5.9e-25 119.4 117 53.8
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 5.5e-23 112.8 300 48.7
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 5.2e-21 106.3 306 46.7
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.5e-20 104.8 122 48.4
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 2.6e-20 104.0 209 33.0
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 2.2e-19 100.9 108 49.1
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 6.3e-19 99.4 87 65.5
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.4e-18 97.4 79 69.6
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 2.7e-17 94.0 133 40.6
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.3e-16 91.7 106 53.8
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.3e-16 90.9 77 66.2
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 5.0e-16 89.7 149 36.9
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 7.2e-15 85.9 139 41.0
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 5.2e-13 79.7 81 48.1
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 2.6e-12 77.4 93 47.3
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 1.3e-11 75.1 93 44.1
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 6.3e-11 72.8 86 45.3
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-06 57.8 93 39.8
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 2.1e-06 57.8 52 55.8
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 3.6e-06 57.0 102 36.3


User provided reference genes

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