Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008233 Chenopodium quinoa HOM05D011779 ORTHO05D014917 5.4e-99 364.4 192 100.0
AUR62008236 Chenopodium quinoa HOM05D011779 ORTHO05D014917 5.4e-99 364.4 192 100.0
AUR62008232 Chenopodium quinoa HOM05D011779 ORTHO05D014917 9.0e-94 347.1 192 95.3
AUR62030987 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.4e-86 323.2 189 88.4
AUR62030986 Chenopodium quinoa HOM05D011779 ORTHO05D014917 3.9e-81 305.1 187 85.6
AUR62030988 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.9e-80 302.8 183 86.9
EL10Ac5g10782 Beta vulgaris HOM05D011779 ORTHO05D014917 4.6e-66 255.0 192 68.8
EL10Ac5g10780 Beta vulgaris HOM05D011779 ORTHO05D014917 2.3e-65 252.7 192 67.7
EL10Ac4g09594 Beta vulgaris HOM05D011779 ORTHO05D014917 3.0e-65 252.3 189 71.4
EL10Ac5g10779 Beta vulgaris HOM05D011779 ORTHO05D014917 3.3e-64 248.8 189 67.7
EL10Ac3g05775 Beta vulgaris HOM05D011779 ORTHO05D014917 6.9e-62 241.1 186 68.8
EL10Ac4g09254 Beta vulgaris HOM05D011779 ORTHO05D014917 1.2e-61 240.4 195 66.7
EL10Ac4g09255 Beta vulgaris HOM05D011779 ORTHO05D014917 1.2e-61 240.4 195 66.7
AUR62005137 Chenopodium quinoa HOM05D011779 ORTHO05D137585 1.1e-40 170.6 192 49.0
AUR62020643 Chenopodium quinoa HOM05D011779 ORTHO05D137858 1.8e-38 163.3 195 47.7
AUR62038735 Chenopodium quinoa HOM05D011779 ORTHO05D137918 1.2e-37 160.6 195 46.2
Oeu028536.1 Olea europaea HOM05D000281 ORTHO05D000290 4.1e-14 82.4 187 26.2
Peaxi162Scf01013g00016 Petunia axillaris HOM05D000281 ORTHO05D000290 7.3e-11 71.6 172 27.3
Dinv28555 Davidia involucrata HOM05D000281 ORTHO05D000290 2.1e-10 70.1 165 24.8
Cfa008206 Carpinus fangiana HOM05D000281 ORTHO05D000290 2.8e-10 69.7 191 25.7
CiPaw.05G217500 Carya illinoinensis HOM05D000281 ORTHO05D000290 2.8e-10 69.7 193 25.9
Lj1P982T31 Lonicera japonica HOM05D000281 ORTHO05D000290 8.0e-10 68.2 190 24.7
Cfa008207 Carpinus fangiana HOM05D000281 ORTHO05D000290 1.4e-09 67.4 191 25.7
Haze_13856 Corylus avellana HOM05D000281 ORTHO05D000290 3.1e-09 66.2 172 26.2
CiPaw.05G218400 Carya illinoinensis HOM05D000281 ORTHO05D000290 5.2e-09 65.5 171 25.7
Solyc11g019910.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 5.2e-09 65.5 178 24.7
PGSC0003DMG400027617 Solanum tuberosum HOM05D000281 ORTHO05D000290 5.2e-09 65.5 178 25.3
Lj8C40T5 Lonicera japonica HOM05D000281 ORTHO05D000290 6.8e-09 65.1 178 26.4
Ciclev10005968m.g Citrus clementina HOM05D000281 ORTHO05D000290 2.6e-08 63.2 188 23.9
QL09p019270 Quercus lobata HOM05D000281 ORTHO05D000290 2.6e-08 63.2 170 24.7
Carub.0008s2303 Capsella rubella HOM05D000281 ORTHO05D000290 4.4e-08 62.4 192 25.0
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 5.8e-08 62.0 190 23.2
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 5.8e-08 62.0 181 23.8
THA.LOC104821406 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 5.8e-08 62.0 182 26.9
Ah.07g207800 Amaranthus hybridus HOM05D000281 ORTHO05D000290 9.8e-08 61.2 165 23.6
Dinv28554 Davidia involucrata HOM05D000281 ORTHO05D000290 9.8e-08 61.2 187 24.1
Manes.14G034600 Manihot esculenta HOM05D000281 ORTHO05D000290 9.8e-08 61.2 186 25.8
Prupe.2G279900 Prunus persica HOM05D000281 ORTHO05D000290 9.8e-08 61.2 189 22.8
Migut.O00299 Erythranthe guttata HOM05D000281 ORTHO05D000290 1.7e-07 60.5 194 25.3
Lsat_1_v5_gn_2_128861 Lactuca sativa HOM05D000281 ORTHO05D000290 1.7e-07 60.5 187 23.5
Nitab4.5_0003732g0010 Nicotiana tabacum HOM05D000281 ORTHO05D000290 1.7e-07 60.5 187 22.5
TAR374G0916 Trochodendron aralioides HOM05D000281 ORTHO05D000290 1.7e-07 60.5 179 24.6
CsaV3_3G016230 Cucumis sativus L. HOM05D000281 ORTHO05D000290 2.2e-07 60.1 190 25.3
DCAR_018096 Daucus carota HOM05D000281 ORTHO05D000290 2.2e-07 60.1 184 27.7
MD00G1105000 Malus domestica HOM05D000281 ORTHO05D000290 2.2e-07 60.1 189 22.2
TAR374G1720 Trochodendron aralioides HOM05D000281 ORTHO05D000290 2.2e-07 60.1 178 24.2
Cpa.g.sc3.304 Carica papaya HOM05D000281 ORTHO05D000290 2.9e-07 59.7 190 22.6
Nitab4.5_0000262g0190 Nicotiana tabacum HOM05D000281 ORTHO05D000290 2.9e-07 59.7 187 23.5
FvH4_7g27850 Fragaria vesca HOM05D000281 ORTHO05D000290 4.9e-07 58.9 193 24.4
FAN06G2202 Fragaria x ananassa HOM05D000281 ORTHO05D000290 4.9e-07 58.9 193 24.4
FAN06G3115 Fragaria x ananassa HOM05D000281 ORTHO05D000290 4.9e-07 58.9 193 24.4
Cc02_g04120 Coffea canephora HOM05D000281 ORTHO05D000290 6.4e-07 58.5 183 21.9
FAN10G1748 Fragaria x ananassa HOM05D000281 ORTHO05D000290 6.4e-07 58.5 193 24.4
Potri.012G127500 Populus trichocarpa HOM05D000281 ORTHO05D000290 6.4e-07 58.5 185 24.3
QL09p019302 Quercus lobata HOM05D000281 ORTHO05D000290 6.4e-07 58.5 163 25.2
Psat7g193360 Pisum sativum HOM05D000281 ORTHO05D000290 8.3e-07 58.2 183 25.1
BcaNung01401 Brassica carinata HOM05D000281 ORTHO05D000290 1.1e-06 57.8 184 25.0
Manes.06G136300 Manihot esculenta HOM05D000281 ORTHO05D000290 1.1e-06 57.8 167 24.0
RcHm_v2.0_Chr1g0374721 Rosa chinensis HOM05D000281 ORTHO05D000290 1.1e-06 57.8 186 22.6
ClCG05G007400 Citrullus lanatus HOM05D000036 ORTHO05D000095 1.4e-06 57.4 190 22.6
Lsat_1_v5_gn_2_128840 Lactuca sativa HOM05D000281 ORTHO05D000290 1.9e-06 57.0 183 24.6
Thecc.03G258900 Theobroma cacao HOM05D000281 ORTHO05D017155 1.9e-06 57.0 164 25.0
CARHR276130 Cardamine hirsuta HOM05D000281 ORTHO05D000290 2.4e-06 56.6 195 24.1
CiPaw.04G061300 Carya illinoinensis HOM05D000281 ORTHO05D000290 2.4e-06 56.6 179 21.8
FAN03G2116 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.4e-06 56.6 193 23.8
Nn6g34063 Nelumbo nucifera HOM05D000281 ORTHO05D000290 2.4e-06 56.6 159 24.5
Eucgr.K00155 Eucalyptus grandis HOM05D000281 ORTHO05D000290 3.2e-06 56.2 192 25.0
Atru.chr1.681 Acer truncatum HOM05D000281 ORTHO05D000290 4.1e-06 55.8 171 23.4
ECA233G0595 Erigeron canadensis HOM05D000281 ORTHO05D000290 4.1e-06 55.8 184 23.4
ECA238G0978 Erigeron canadensis HOM05D000281 ORTHO05D000290 4.1e-06 55.8 129 26.4
RcHm_v2.0_Chr1g0374711 Rosa chinensis HOM05D000281 ORTHO05D000290 4.1e-06 55.8 123 28.5
PGSC0003DMG400021574 Solanum tuberosum HOM05D000281 ORTHO05D000290 4.1e-06 55.8 188 22.9
CiPaw.05G218500 Carya illinoinensis HOM05D000281 ORTHO05D000290 5.4e-06 55.5 184 25.0
Peaxi162Scf00241g00053 Petunia axillaris HOM05D000281 ORTHO05D000290 5.4e-06 55.5 189 23.8
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 5.4e-06 55.5 190 24.2
TWI81G0114 Tripterygium wilfordii HOM05D000281 ORTHO05D000290 5.4e-06 55.5 189 25.9
TAR629G0898 Trochodendron aralioides HOM05D000281 ORTHO05D000290 5.4e-06 55.5 186 23.1
Gohir.A08G172800 Gossypium hirsutum HOM05D000281 ORTHO05D000290 7.0e-06 55.1 157 24.2
MBI12_g20409_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 7.0e-06 55.1 164 20.1
Manes.01G074850 Manihot esculenta HOM05D000281 ORTHO05D000290 7.0e-06 55.1 181 26.0
Potri.015G128700 Populus trichocarpa HOM05D000281 ORTHO05D000290 7.0e-06 55.1 187 22.5
AL8G39180 Arabidopsis lyrata HOM05D000281 ORTHO05D000290 9.2e-06 54.7 195 23.6
AT5G62350 Arabidopsis thaliana HOM05D000281 ORTHO05D000290 9.2e-06 54.7 195 24.6
BcaB02g09639 Brassica carinata HOM05D000281 ORTHO05D000290 9.2e-06 54.7 159 25.2
Migut.O00300 Erythranthe guttata HOM05D000281 ORTHO05D000290 9.2e-06 54.7 183 21.9
Gohir.D08G191600 Gossypium hirsutum HOM05D000281 ORTHO05D000290 9.2e-06 54.7 157 23.6
Hma1.2p1_0654F.1_g196605 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 9.2e-06 54.7 189 24.9
Hma1.2p1_0654F.1_g196640 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 9.2e-06 54.7 189 25.4
Sopen03g023510 Solanum pennellii HOM05D000281 ORTHO05D000290 9.2e-06 54.7 188 24.5


User provided reference genes

Program Settings