Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008232 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.2e-98 363.2 192 100.0
AUR62008233 Chenopodium quinoa HOM05D011779 ORTHO05D014917 6.9e-94 347.4 192 95.3
AUR62008236 Chenopodium quinoa HOM05D011779 ORTHO05D014917 6.9e-94 347.4 192 95.3
AUR62030987 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.8e-86 322.8 189 88.9
AUR62030986 Chenopodium quinoa HOM05D011779 ORTHO05D014917 2.3e-81 305.8 187 86.1
AUR62030988 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.9e-80 302.8 183 87.4
EL10Ac5g10782 Beta vulgaris HOM05D011779 ORTHO05D014917 5.1e-65 251.5 192 67.7
EL10Ac5g10780 Beta vulgaris HOM05D011779 ORTHO05D014917 2.5e-64 249.2 192 66.7
EL10Ac4g09594 Beta vulgaris HOM05D011779 ORTHO05D014917 7.4e-64 247.7 189 70.4
EL10Ac5g10779 Beta vulgaris HOM05D011779 ORTHO05D014917 4.8e-63 245.0 189 66.7
EL10Ac3g05775 Beta vulgaris HOM05D011779 ORTHO05D014917 5.9e-61 238.0 186 67.7
EL10Ac4g09254 Beta vulgaris HOM05D011779 ORTHO05D014917 7.6e-61 237.7 195 65.6
EL10Ac4g09255 Beta vulgaris HOM05D011779 ORTHO05D014917 7.6e-61 237.7 195 65.6
AUR62005137 Chenopodium quinoa HOM05D011779 ORTHO05D137585 1.8e-38 163.3 192 46.9
AUR62020643 Chenopodium quinoa HOM05D011779 ORTHO05D137858 1.1e-35 154.1 195 45.6
AUR62038735 Chenopodium quinoa HOM05D011779 ORTHO05D137918 1.5e-35 153.7 195 44.6
Oeu028536.1 Olea europaea HOM05D000281 ORTHO05D000290 8.3e-15 84.7 187 26.7
Cpa.g.sc3.305 Carica papaya HOM05D000281 ORTHO05D000290 5.6e-11 72.0 165 26.7
PGSC0003DMG400010813 Solanum tuberosum HOM05D000281 ORTHO05D000290 5.6e-11 72.0 183 26.2
Peaxi162Scf01013g00016 Petunia axillaris HOM05D000281 ORTHO05D000290 2.1e-10 70.1 172 27.3
Lj1P982T31 Lonicera japonica HOM05D000281 ORTHO05D000290 2.8e-10 69.7 190 25.3
Dinv28555 Davidia involucrata HOM05D000281 ORTHO05D000290 6.1e-10 68.6 165 24.2
Sopen03g023460 Solanum pennellii HOM05D000281 ORTHO05D000290 6.1e-10 68.6 181 25.4
Cfa008206 Carpinus fangiana HOM05D000281 ORTHO05D000290 8.0e-10 68.2 191 25.1
CiPaw.05G217500 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.0e-09 67.8 193 25.4
CiPaw.03G095200 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.8e-09 67.0 187 24.6
Cfa008207 Carpinus fangiana HOM05D000281 ORTHO05D000290 4.0e-09 65.9 191 25.1
Peaxi162Scf00241g00054 Petunia axillaris HOM05D000281 ORTHO05D000290 6.8e-09 65.1 173 27.2
PGSC0003DMG400027617 Solanum tuberosum HOM05D000281 ORTHO05D000290 8.9e-09 64.7 178 25.3
TAR374G0916 Trochodendron aralioides HOM05D000281 ORTHO05D000290 1.2e-08 64.3 179 25.1
Ciclev10005968m.g Citrus clementina HOM05D000281 ORTHO05D000290 1.5e-08 63.9 188 23.9
CsaV3_3G016230 Cucumis sativus L. HOM05D000281 ORTHO05D000290 1.5e-08 63.9 190 26.3
Lj8C40T5 Lonicera japonica HOM05D000281 ORTHO05D000290 1.5e-08 63.9 178 25.8
MD00G1105100 Malus domestica HOM05D000281 ORTHO05D000290 1.5e-08 63.9 158 24.7
Solyc11g019910.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 1.5e-08 63.9 178 24.7
CiPaw.05G218400 Carya illinoinensis HOM05D000281 ORTHO05D000290 2.6e-08 63.2 171 25.1
Migut.O00299 Erythranthe guttata HOM05D000281 ORTHO05D000290 3.4e-08 62.8 194 25.8
Prupe.2G279900 Prunus persica HOM05D000281 ORTHO05D000290 4.4e-08 62.4 189 22.8
Carub.0008s2303 Capsella rubella HOM05D000281 ORTHO05D000290 5.8e-08 62.0 192 24.5
MD00G1105000 Malus domestica HOM05D000281 ORTHO05D000290 5.8e-08 62.0 189 22.8
Manes.14G034600 Manihot esculenta HOM05D000281 ORTHO05D000290 5.8e-08 62.0 186 25.8
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 5.8e-08 62.0 181 23.2
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 7.5e-08 61.6 190 22.6
Nitab4.5_0000262g0190 Nicotiana tabacum HOM05D000281 ORTHO05D000290 9.8e-08 61.2 187 23.5
Solyc03g083660.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 9.8e-08 61.2 181 23.2
TAR374G1720 Trochodendron aralioides HOM05D000281 ORTHO05D000290 9.8e-08 61.2 178 24.2
FvH4_7g27850 Fragaria vesca HOM05D000281 ORTHO05D000290 1.3e-07 60.8 193 24.9
FAN06G2202 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.3e-07 60.8 193 24.9
FAN06G3115 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.3e-07 60.8 193 24.9
Nitab4.5_0003732g0010 Nicotiana tabacum HOM05D000281 ORTHO05D000290 1.3e-07 60.8 187 22.5
Cpa.g.sc3.304 Carica papaya HOM05D000281 ORTHO05D000290 1.7e-07 60.5 190 22.6
Dinv28554 Davidia involucrata HOM05D000281 ORTHO05D000290 1.7e-07 60.5 187 23.0
FAN10G1748 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.7e-07 60.5 193 24.9
Ah.07g207800 Amaranthus hybridus HOM05D000281 ORTHO05D000290 2.2e-07 60.1 165 23.6
ECA238G0978 Erigeron canadensis HOM05D000281 ORTHO05D000290 2.2e-07 60.1 129 27.1
Migut.F00460 Erythranthe guttata HOM05D000281 ORTHO05D000290 2.2e-07 60.1 192 22.4
TAR629G0898 Trochodendron aralioides HOM05D000281 ORTHO05D000290 2.2e-07 60.1 186 23.7
Potri.012G127500 Populus trichocarpa HOM05D000281 ORTHO05D000290 2.9e-07 59.7 185 24.3
RcHm_v2.0_Chr1g0374721 Rosa chinensis HOM05D000281 ORTHO05D000290 2.9e-07 59.7 186 23.1
RcHm_v2.0_Chr1g0374711 Rosa chinensis HOM05D000281 ORTHO05D000290 3.7e-07 59.3 156 25.6
THA.LOC104821406 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 3.7e-07 59.3 182 26.4
Nn6g34063 Nelumbo nucifera HOM05D000281 ORTHO05D000290 4.9e-07 58.9 159 25.8
FAN03G2116 Fragaria x ananassa HOM05D000281 ORTHO05D000290 6.4e-07 58.5 193 24.4
Manes.06G136300 Manihot esculenta HOM05D000281 ORTHO05D000290 6.4e-07 58.5 167 24.0
Aqoxy7G00697 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 8.3e-07 58.2 188 22.9
DCAR_018096 Daucus carota HOM05D000281 ORTHO05D000290 8.3e-07 58.2 184 27.2
Eucgr.E00464 Eucalyptus grandis HOM05D000281 ORTHO05D000290 8.3e-07 58.2 188 25.0
Hma1.2p1_0654F.1_g196605 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 8.3e-07 58.2 189 25.4
Hma1.2p1_0654F.1_g196640 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 8.3e-07 58.2 189 25.9
Lsat_1_v5_gn_2_128840 Lactuca sativa HOM05D000281 ORTHO05D000290 8.3e-07 58.2 182 23.1
Peaxi162Scf00241g00053 Petunia axillaris HOM05D000281 ORTHO05D000290 8.3e-07 58.2 189 24.3
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 8.3e-07 58.2 190 24.7
Haze_13846 Corylus avellana HOM05D000281 ORTHO05D000290 1.1e-06 57.8 171 21.6
Thecc.09G071700 Theobroma cacao HOM05D000281 ORTHO05D007047 1.1e-06 57.8 189 31.2
MBI12_g20409_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 1.4e-06 57.4 164 20.7
Sopen03g023510 Solanum pennellii HOM05D000281 ORTHO05D000290 1.4e-06 57.4 188 25.5
PGSC0003DMG400021574 Solanum tuberosum HOM05D000281 ORTHO05D000290 1.4e-06 57.4 188 22.9
Cfa008212 Carpinus fangiana HOM05D000281 ORTHO05D000290 1.9e-06 57.0 180 22.2
CiPaw.04G061300 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.9e-06 57.0 179 21.8
Glyma.04G118900 Glycine max HOM05D000281 ORTHO05D000290 1.9e-06 57.0 158 21.5
RcHm_v2.0_Chr1g0374701 Rosa chinensis HOM05D000281 ORTHO05D000290 1.9e-06 57.0 186 23.1
Solyc03g083720.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 1.9e-06 57.0 190 24.2
Atru.chr1.678 Acer truncatum HOM05D000281 ORTHO05D000290 2.4e-06 56.6 196 24.5
ClCG05G007400 Citrullus lanatus HOM05D000036 ORTHO05D000095 2.4e-06 56.6 190 22.6
THA.LOC104825066 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 2.4e-06 56.6 193 24.4
Haze_26052 Corylus avellana HOM05D000281 ORTHO05D007047 3.2e-06 56.2 189 29.6
Migut.O00300 Erythranthe guttata HOM05D000281 ORTHO05D000290 3.2e-06 56.2 183 21.9
Actinidia25017 Actinidia chinensis HOM05D000281 ORTHO05D000290 4.1e-06 55.8 164 24.4
Migut.F00458 Erythranthe guttata HOM05D000281 ORTHO05D000290 4.1e-06 55.8 181 22.1
Gohir.A08G172800 Gossypium hirsutum HOM05D000281 ORTHO05D000290 5.4e-06 55.5 157 24.2
MBI12_g40384_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 5.4e-06 55.5 194 21.1
PGSC0003DMG400010814 Solanum tuberosum HOM05D000281 ORTHO05D000290 5.4e-06 55.5 148 26.4
Actinidia03078 Actinidia chinensis HOM05D000281 ORTHO05D000290 7.0e-06 55.1 176 20.5
Aa31LG9G10220 Aethionema arabicum HOM05D000281 ORTHO05D000290 7.0e-06 55.1 190 22.6
Duzib084G1386 Durio zibethinus HOM05D000281 ORTHO05D000290 7.0e-06 55.1 157 24.2
FAN03G3160 Fragaria x ananassa HOM05D000281 ORTHO05D000290 7.0e-06 55.1 98 28.6
Gohir.D08G191600 Gossypium hirsutum HOM05D000281 ORTHO05D000290 7.0e-06 55.1 157 23.6
Peaxi162Scf00191g10112 Petunia axillaris HOM05D000281 ORTHO05D007047 7.0e-06 55.1 166 26.5
Psat7g193360 Pisum sativum HOM05D000281 ORTHO05D000290 7.0e-06 55.1 183 24.6
DCAR_018099 Daucus carota HOM05D000281 ORTHO05D000290 9.2e-06 54.7 188 23.4
Gorai.003G168700 Gossypium raimondii HOM05D000281 ORTHO05D000290 9.2e-06 54.7 183 24.0
Solyc03g083710.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 9.2e-06 54.7 188 25.0
PGSC0003DMG400010815 Solanum tuberosum HOM05D000281 ORTHO05D000290 9.2e-06 54.7 190 23.7


User provided reference genes

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