Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 0.0e+00 2064.3 1031 100.0
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 0.0e+00 1921.4 1059 91.3
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 0.0e+00 1386.3 1074 69.2
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 0.0e+00 1239.6 1173 59.5
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 0.0e+00 1122.5 1083 58.2
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.0e-272 943.0 1107 51.6
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 9.6e-227 791.2 1127 45.3
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.1e-225 787.7 1067 45.9
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 3.1e-225 786.2 1163 44.4
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 9.3e-222 774.6 1131 43.9
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 4.6e-221 772.3 1155 43.3
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.8e-220 770.4 1156 43.7
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 2.3e-220 770.0 1116 45.0
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.1e-220 768.8 1127 44.2
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 7.4e-219 765.0 1096 44.7
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 2.2e-218 763.5 1078 45.2
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.8e-218 762.3 1092 44.5
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 8.2e-218 761.5 1142 43.8
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.1e-217 759.2 1108 45.3
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 4.5e-216 755.7 1110 43.8
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.0e-215 754.6 1052 44.4
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.3e-215 754.2 1159 42.7
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.7e-215 753.8 1111 44.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.8e-215 752.7 1129 43.9
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 3.2e-214 749.6 1034 45.7
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.6e-213 747.3 1058 44.9
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 4.6e-213 745.7 1091 43.8
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.9e-212 742.7 1129 43.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 6.7e-212 741.9 1064 44.6
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 2.5e-211 740.0 1149 43.0
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 2.5e-211 740.0 1133 42.4
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.3e-210 737.6 1042 45.3
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.8e-210 736.5 1092 44.3
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 6.3e-210 735.3 1182 43.3
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 4.1e-209 732.6 1160 42.2
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.9e-209 731.9 1205 40.9
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.2e-208 731.1 1165 42.4
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.5e-208 730.7 1098 44.8
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-207 727.2 1226 40.6
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 5.0e-207 725.7 1121 42.0
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.1e-206 724.5 1141 42.7
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.1e-206 724.5 1093 44.3
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 2.2e-202 710.3 1088 42.9
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.2e-202 710.3 1122 41.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.1e-201 708.0 1148 41.5
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 4.1e-201 706.1 1046 42.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.0e-201 705.3 994 45.2
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 2.6e-200 703.4 1061 42.8
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 7.7e-200 701.8 1033 43.6
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 2.9e-199 699.9 1094 41.8
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.5e-198 697.6 1121 41.7
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.5e-198 697.6 1086 41.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.5e-198 696.8 1044 42.1
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 7.2e-198 695.3 1034 42.6
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 9.4e-198 694.9 1037 43.0
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.2e-197 694.5 1088 42.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 8.0e-197 691.8 867 48.0
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 8.8e-196 688.3 1082 41.9
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 8.8e-196 688.3 1048 42.6
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.1e-195 688.0 1016 42.6
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 5.7e-195 685.6 1059 41.8
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.3e-194 684.5 1120 41.3
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.7e-194 684.1 556 61.5
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 4.1e-193 679.5 1050 42.1
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.0e-192 677.2 1122 41.2
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.0e-191 674.9 979 43.9
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 3.8e-191 672.9 1023 42.8
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 6.5e-191 672.2 1033 41.4
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 8.5e-191 671.8 1032 42.5
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 4.2e-190 669.5 1029 42.6
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 9.4e-190 668.3 979 44.0
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.6e-189 667.5 1058 42.2
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.8e-188 664.1 1123 40.6
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.8e-188 664.1 953 44.3
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.3e-188 663.7 1128 39.4
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 4.0e-188 662.9 1023 41.3
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 6.8e-188 662.1 1022 41.4
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 8.8e-188 661.8 1022 42.3
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 8.8e-188 661.8 1037 42.5
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.5e-187 661.0 1028 41.2
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 4.4e-187 659.4 1067 41.8
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.7e-186 657.5 925 43.5
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.4e-185 654.4 1054 42.0
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.8e-185 654.1 1126 40.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 9.1e-185 651.7 1054 40.7
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 9.1e-185 651.7 1020 41.9
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 3.5e-184 649.8 913 43.4
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.1e-182 644.8 1031 40.9
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.1e-182 644.8 1132 39.3
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.2e-181 641.3 893 43.4
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 3.4e-179 633.3 560 58.4
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.8e-178 630.2 958 42.0
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 4.0e-172 609.8 1042 39.1
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.3e-167 594.7 994 38.9
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 3.3e-166 590.1 953 40.0
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 4.4e-163 579.7 900 42.8
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 6.4e-162 575.9 1029 38.1
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.1e-157 560.8 569 51.8
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 8.6e-151 538.9 697 46.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.1e-149 534.3 1122 37.7
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 8.7e-127 459.1 886 37.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.9e-121 441.4 1119 33.5
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.5e-118 431.8 366 59.8
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.8e-116 424.9 422 52.1
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 5.8e-115 419.9 768 35.5
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 5.5e-113 413.3 511 46.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 4.6e-112 410.2 498 44.4
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 1.9e-110 404.8 312 63.5
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.4e-108 398.7 608 41.4
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-105 389.0 858 36.5
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.8e-103 381.7 461 46.9
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 8.7e-103 379.4 816 36.2
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.6e-99 367.9 513 42.3
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.1e-78 299.3 729 34.6
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.8e-71 275.4 674 33.4
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.6e-67 262.3 653 34.2
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 2.7e-67 261.5 227 63.0
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.6e-62 245.0 221 56.1
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.2e-27 129.8 276 31.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 8.9e-23 113.6 322 34.8
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.3e-18 99.8 145 39.3
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.1e-17 96.7 98 60.2
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 1.5e-17 96.3 340 29.1
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.2e-14 86.7 91 50.5
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 5.8e-14 84.3 59 57.6
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 4.9e-13 81.3 115 40.0
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 6.4e-13 80.9 57 57.9
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 3.2e-12 78.6 61 52.5
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 9.3e-12 77.0 68 51.5
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.1e-11 75.9 177 38.4
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-10 72.8 154 42.2
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.3e-10 72.4 55 54.5
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 8.1e-08 63.9 138 35.5


User provided reference genes

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