Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.3e-174 615.5 321 100.0
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.3e-124 450.3 255 92.2
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 4.6e-119 431.8 262 87.4
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 3.0e-86 322.8 237 74.7
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 4.5e-82 308.9 253 66.0
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 4.4e-69 265.8 258 55.4
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.2e-66 257.7 259 53.7
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.0e-62 244.6 259 52.5
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 1.8e-62 243.8 258 51.6
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 4.0e-62 242.7 256 52.0
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 6.8e-62 241.9 258 51.9
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.2e-61 241.1 254 50.0
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.8e-60 236.5 254 51.2
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 2.8e-60 236.5 286 47.9
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.4e-59 233.4 254 50.4
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 4.1e-59 232.6 256 51.2
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 7.0e-59 231.9 256 49.6
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 9.2e-59 231.5 256 50.0
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.2e-58 231.1 281 45.9
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.6e-58 230.7 251 50.6
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 2.0e-58 230.3 249 50.2
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 3.5e-58 229.6 279 46.2
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 3.5e-58 229.6 257 47.9
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 4.5e-58 229.2 251 50.2
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 5.9e-58 228.8 256 50.4
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 7.8e-58 228.4 280 45.7
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 7.8e-58 228.4 249 51.0
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 8.6e-57 224.9 251 49.0
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 8.6e-57 224.9 256 48.4
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 1.5e-56 224.2 299 43.5
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 1.5e-56 224.2 253 47.4
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 4.3e-56 222.6 257 48.2
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 9.5e-56 221.5 249 50.6
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.2e-55 221.1 249 49.0
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.6e-55 220.7 259 46.7
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 2.1e-55 220.3 263 47.5
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 2.8e-55 219.9 259 47.9
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.6e-55 219.5 256 48.0
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 4.7e-55 219.2 258 47.7
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.7e-55 219.2 261 48.7
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 6.1e-55 218.8 258 47.7
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.0e-55 218.4 256 47.7
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 8.0e-55 218.4 270 47.0
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 8.0e-55 218.4 256 46.5
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 1.4e-54 217.6 249 50.2
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.4e-54 217.6 246 49.2
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 3.1e-54 216.5 246 49.6
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 5.2e-54 215.7 256 48.8
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 8.9e-54 214.9 283 45.6
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 4.4e-53 212.6 252 46.8
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 5.8e-53 212.2 243 47.7
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 5.8e-53 212.2 256 48.4
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 1.3e-52 211.1 258 45.0
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.2e-52 210.3 247 45.3
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 4.9e-52 209.1 253 46.2
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 8.3e-52 208.4 248 47.2
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 8.3e-52 208.4 254 46.9
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.1e-51 208.0 253 45.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.9e-51 207.2 264 46.6
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 4.1e-51 206.1 252 44.8
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 1.2e-50 204.5 249 44.6
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.6e-50 204.1 250 46.0
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.6e-50 202.6 258 45.0
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 4.6e-50 202.6 270 42.2
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 7.8e-50 201.8 257 44.7
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.0e-49 201.4 241 46.9
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.0e-49 201.4 252 46.0
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 1.7e-49 200.7 243 44.9
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.9e-49 199.5 250 44.4
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.9e-49 199.5 261 44.8
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 3.9e-49 199.5 258 44.6
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.0e-49 199.1 250 46.0
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 5.0e-49 199.1 249 45.8
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 5.0e-49 199.1 261 44.1
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 6.6e-49 198.7 257 44.7
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 6.6e-49 198.7 258 45.0
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 1.1e-48 198.0 250 46.4
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.9e-48 197.2 243 44.0
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.9e-48 197.2 254 44.1
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 5.6e-48 195.7 251 44.6
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 9.5e-48 194.9 254 42.9
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.6e-47 194.1 254 45.7
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 2.8e-47 193.4 254 44.5
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 2.8e-47 193.4 312 39.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.3e-46 190.3 257 44.0
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 4.0e-46 189.5 255 41.2
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 5.2e-46 189.1 255 41.2
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 5.2e-46 189.1 255 41.2
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 6.8e-46 188.7 254 42.1
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 6.8e-46 188.7 244 43.9
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 1.2e-45 188.0 254 42.9
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 1.2e-45 188.0 267 41.2
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.2e-45 188.0 252 41.7
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 2.0e-45 187.2 243 43.2
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 4.4e-45 186.0 253 40.3
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 5.8e-45 185.7 312 38.1
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 7.5e-45 185.3 256 41.0
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 1.7e-44 184.1 254 43.3
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 2.9e-44 183.3 254 41.7
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 8.3e-44 181.8 282 40.4
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.4e-43 180.3 259 40.5
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 5.4e-43 179.1 244 42.2
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 7.1e-43 178.7 299 37.8
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 1.2e-42 177.9 237 45.1
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 1.6e-42 177.6 304 37.5
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 2.1e-42 177.2 256 40.2
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 1.3e-41 174.5 256 39.5
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.5e-40 170.2 246 40.2
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.5e-40 170.2 252 40.5
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 4.3e-40 169.5 252 41.3
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 1.2e-39 167.9 207 45.4
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 3.6e-39 166.4 175 51.4
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 6.2e-39 165.6 185 49.2
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.0e-38 162.9 256 39.5
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.0e-38 162.9 256 39.5
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 9.9e-37 158.3 173 49.1
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 1.3e-36 157.9 229 42.8
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.7e-36 157.5 255 40.0
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.7e-36 157.5 185 49.2
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 2.2e-36 157.1 185 49.2
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 2.1e-34 150.6 224 39.7
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 7.8e-34 148.7 250 38.8
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 1.0e-33 148.3 241 39.4
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 3.9e-33 146.4 216 42.6
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.1e-32 144.8 233 38.2
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.1e-30 136.7 237 35.4
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 2.0e-29 134.0 221 37.6
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 3.4e-29 133.3 129 52.7
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 7.6e-29 132.1 210 37.1
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.7e-28 131.0 241 34.9
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 6.4e-28 129.0 239 34.7
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.1e-27 128.3 151 45.7
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.2e-27 126.3 132 48.5
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 3.3e-24 116.7 149 42.3
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.1e-22 111.7 221 33.9
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 1.2e-21 108.2 221 34.4
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 4.4e-21 106.3 209 34.9
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 2.4e-19 100.5 236 32.2
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.6e-18 97.8 217 33.6
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 7.8e-18 95.5 138 39.1
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.0e-17 95.1 183 36.1
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 5.1e-17 92.8 140 42.1
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 2.5e-16 90.5 96 44.8
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 9.6e-16 88.6 179 33.5
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 3.2e-11 73.6 98 43.9
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.0e-09 67.0 112 33.9
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.9e-09 66.6 59 52.5
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 1.5e-08 64.7 181 27.1
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.3e-07 61.6 167 24.6
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 9.0e-06 55.5 69 42.0


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